RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA785164", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA785164 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
766233 766233 PRJNA785164_P_NODE_41361_length_280_cov_1.830918_g40896_i0 PRJNA785164 41361 280 1.830918 5.1265704 Hydra vulgaris 6087 Cnidaria other_Eukaryota 52.8 0.026   NTclustered gi|2744822101|ref|XM_012703865.3| 6087 g40896 i0 100 0.2 28 0 10 0 149 176 926 953 PREDICTED: Hydra vulgaris post-GPI attachment to proteins factor 2 (LOC101237864), mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
28253776 28253776 PRJNA785164_P_NODE_61946_length_241_cov_0.916667_g61481_i0 PRJNA785164 61946 241 0.916667 2.20916747 Xenia sp. Carnegie-2 86540 Cnidaria other_Eukaryota 53.1 4.01e-6   NR XP_046841369.1 2897299 g61481 i0 30.7 0.933609958506224 75 50 90.9 1 21 239 25 99 XP_046841369.1 LOW QUALITY PROTEIN: ras-like GTP-binding protein rhoA [Xenia sp. Carnegie-2017] diamond 225 53.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;