RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA785164" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 6 ✖

bioproject 1

  • PRJNA785164 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28601253 28601253 PRJNA785164_P_NODE_60427_length_242_cov_1.621302_g59962_i0 PRJNA785164 60427 242 1.621302 3.92355084 Methanoregulaceae archaeon PtaU1.Bin222 1811726 Archaea Archaea 92.4 6.73e-20   NR OPY47876.1 1811726 g59962 i0 84.3 1.28925619834711 51 8 63.2 0 172 20 6 56 OPY47876.1 MAG: hypothetical protein A4E42_00230 [Methanoregulaceae archaeon PtaU1.Bin222] diamond 312 92.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon PtaU1.Bin222
29958860 29958860 PRJNA785164_P_NODE_35151_length_306_cov_0.961373_g34686_i0 PRJNA785164 35151 306 0.961373 2.94180138 Halobacteriales archaeon 1904752 Archaea Archaea 63.9 3.94e-10   NR MFB6298912.1 1904752 g34686 i0 46.2 0.637254901960784 65 33 61.8 1 229 41 23 87 MFB6298912.1 group I intron-associated PD-(D/E)XK endonuclease [Halobacteriales archaeon] diamond 195 63.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon
30884395 30884395 PRJNA785164_P_NODE_61914_length_241_cov_0.916667_g61449_i0 PRJNA785164 61914 241 0.916667 2.20916747 root 1 Root_unresolved Root_unresolved 117 5.55e-32   NR HET8685399.1 2213 g61449 i0 74.2 2.50207468879668 66 17 82.2 0 240 43 34 99 HET8685399.1 dATP/dGTP diphosphohydrolase domain-containing protein [Methanosarcina sp.] diamond 603 118 0.991525423728814 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
31349359 31349359 PRJNA785164_P_NODE_36316_length_300_cov_1.356828_g35851_i0 PRJNA785164 36316 300 1.356828 4.070484 Methanomicrobia archaeon 2268195 Archaea Archaea 73.2 6.22e-13   NR MBC8521274.1 2268195 g35851 i0 32.6 0.95 95 61 94 2 300 19 75 167 MBC8521274.1 hypothetical protein [Methanomicrobia archaeon] diamond 285 73.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia       Methanomicrobia archaeon
31349363 31349363 PRJNA785164_P_NODE_57256_length_245_cov_1.343023_g56791_i0 PRJNA785164 57256 245 1.343023 3.29040635 Methanomicrobiales archaeon 2184052 Archaea Archaea 76.6 3.92e-14   NR MDD1677633.1 2184052 g56791 i0 60.5 0.930612244897959 76 29 93.1 1 243 16 79 153 MDD1677633.1 hypothetical protein [Methanomicrobiales archaeon] diamond 228 76.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     Methanomicrobiales archaeon
31570847 31570847 PRJNA785164_P_NODE_56156_length_246_cov_1.549133_g55691_i0 PRJNA785164 56156 246 1.549133 3.81086718 Methanosarcina sp. 2213 Archaea Archaea 46.6 3.62e-4   NR HET8685956.1 2213 g55691 i0 59.5 0.451219512195122 37 14 45.1 1 134 244 1 36 HET8685956.1 hypothetical protein [Methanosarcina sp.] diamond 111 46.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;