RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA785164", tax_clade = "Pithoviruses" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 1 ✖

tax_clade 1

  • Pithoviruses · 1 ✖

bioproject 1

  • PRJNA785164 · 1 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29927466 29927466 PRJNA785164_P_NODE_61931_length_241_cov_0.916667_g61466_i0 PRJNA785164 61931 241 0.916667 2.20916747 Pithovirus LCPAC4 2506595 Viruses Viruses 49.3 1.66e-4   NR QBK92532.1 2506595 g61466 i0 39 1.46887966804979 59 33 72.2 2 177 4 61 117 QBK92532.1 MAG: hypothetical protein LCPAC401_01700 [Pithovirus LCPAC401] diamond 354 49.3 1 Viruses Pithoviruses             Pithovirus LCPAC401

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;