RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA785164", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA785164 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27148039 27148039 PRJNA785164_P_NODE_53102_length_249_cov_1.159091_g52637_i0 PRJNA785164 53102 249 1.159091 2.88613659 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 105 4.579999999999999e-24   NR MFH0984036.1 2035772 g52637 i0 69.5 0.987951807228916 82 24 98.8 1 3 248 315 395 MFH0984036.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 246 105 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30306937 30306937 PRJNA785164_P_NODE_54192_length_248_cov_0.880000_g53727_i0 PRJNA785164 54192 248 0.88 2.1824 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 68.6 3.24e-11   NR MDP3790309.1 2035772 g53727 i0 50.6 1.00403225806452 83 37 98 2 5 247 238 318 MDP3790309.1 putative Ig domain-containing protein [Candidatus Omnitrophota bacterium] diamond 249 68.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;