RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA785164", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA785164 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3317570 3317570 PRJNA785164_P_NODE_43663_length_272_cov_13.437186_g43198_i0 PRJNA785164 43663 272 13.437186 36.54914592 Mytilus californianus 6549 Mollusca Mollusca 56.5 0.002   NTclustered gi|2334608986|ref|XM_052206883.1| 6549 g43198 i0 94.444 0.132352941176471 36 2 13 0 79 114 2645 2610 PREDICTED: Mytilus californianus RING finger protein 11-like (LOC127702581), mRNA blastn 36 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
32076805 32076805 PRJNA785164_P_NODE_42938_length_275_cov_1.396040_g42473_i0 PRJNA785164 42938 275 1.39604 3.83911 Plakobranchus ocellatus 259542 Mollusca Mollusca 44.7 0.0114   NR GFN77005.1 259542 g42473 i0 37.7 4.24363636363636 61 36 65.5 2 256 77 38 97 GFN77005.1 RING finger protein 207-like [Plakobranchus ocellatus] diamond 1167 44.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Plakobranchus Plakobranchus ocellatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;