RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA785164", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 1 ✖

tax_phylum 1

tax_clade 1

  • Metamonada · 1 ✖

bioproject 1

  • PRJNA785164 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14795188 14795188 PRJNA785164_P_NODE_54692_length_248_cov_0.880000_g54227_i0 PRJNA785164 54692 248 0.88 2.1824 Giardia intestinalis 5741 Fornicata other_Eukaryota 70.9 4.98e-12   NR XP_001707569.1 5741 g54227 i0 53.8 1.8508064516129 78 34 94.4 2 3 236 253 328 XP_001707569.1 Kinesin-4 [Giardia intestinalis] diamond 459 70.9 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;