RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA785164", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA785164 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26610257 26610257 PRJNA785164_P_NODE_33461_length_314_cov_2.041494_g32996_i0 PRJNA785164 33461 314 2.041494 6.41029116 Fidelibacterota bacterium 2026760 Bacteria Bacteria 47.4 0.00185   NR MDP6967309.1 2026760 g32996 i0 29.1 1.05095541401274 110 52 81.2 4 59 313 6 114 MDP6967309.1 Ig-like domain-containing protein [Fidelibacterota bacterium] diamond 330 47.4 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29453295 29453295 PRJNA785164_P_NODE_29210_length_339_cov_1.270677_g28745_i0 PRJNA785164 29210 339 1.270677 4.30759503 Fidelibacterota bacterium 2026760 Bacteria Bacteria 79.7 1.17e-14   NR MFC1483896.1 2026760 g28745 i0 44.9 0.946902654867257 107 54 91.2 4 332 24 248 353 MFC1483896.1 hypothetical protein [Fidelibacterota bacterium] diamond 321 79.7 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;