RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA785164", tax_clade = "FCB group" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA785164 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28948683 28948683 PRJNA785164_P_NODE_49648_length_255_cov_1.032967_g49183_i0 PRJNA785164 49648 255 1.032967 2.63406585 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 43.1 0.0307   NR UCG53158.1 2053570 g49183 i0 48.8 0.482352941176471 41 21 48.2 0 123 1 233 273 UCG53158.1 MAG: hypothetical protein JSW58_06290 [Candidatus Latescibacterota bacterium] diamond 123 43.1 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
32740564 32740564 PRJNA785164_P_NODE_56780_length_246_cov_0.890173_g56315_i0 PRJNA785164 56780 246 0.890173 2.18982558 Candidatus Latescibacteria bacterium ADurb.Bin168 1852850 Bacteria Bacteria 75.9 4.19e-14   NR OQB34950.1 1852850 g56315 i0 52.6 0.951219512195122 78 37 95.1 0 241 8 150 227 OQB34950.1 MAG: hypothetical protein BWY06_03303 [Candidatus Latescibacteria bacterium ADurb.Bin168] diamond 234 75.9 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacteria bacterium ADurb.Bin168

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;