RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA784979", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 12 ✖

tax_phylum 1

  • Pisuviricota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA784979 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
765586 765586 PRJNA784979_S_NODE_6701_length_194_cov_1.013793_g6659_i0 PRJNA784979 6701 194 1.013793 1.96675842 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 268 1.5299999999999998e-67   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g6659 i0 91.753 1 194 14 100 2 1 194 6160 5969 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 194 268 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
3316797 3316797 PRJNA784979_S_NODE_12743_length_162_cov_1.088496_g12701_i0 PRJNA784979 12743 162 1.088496 1.76336352 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 200 4.549999999999998e-47   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g12701 i0 90.196 0.944444444444444 153 15 94 0 10 162 5934 5782 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 153 200 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
8418679 8418679 PRJNA784979_S_NODE_4647_length_221_cov_1.534884_g4605_i0 PRJNA784979 4647 221 1.534884 3.39209364 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 241 3.8900000000000003e-59   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g4605 i0 91.86 0.778280542986425 172 14 78 0 4 175 5086 4915 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 172 241 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
9693904 9693904 PRJNA784979_S_NODE_1568_length_385_cov_1.163690_g1526_i0 PRJNA784979 1568 385 1.16369 4.4802065 Blacklegged tick picorna-like virus 2 2080259 Viruses Viruses 688 0   NTclustered gi|1338075553|gb|MG647772.1| 2080259 g1526 i0 99.471 1.95844155844156 378 2 98 0 4 381 696 1073 Blacklegged tick picorna-like virus 2 isolate RTS-11.3 hypothetical protein gene, partial cds blastn 754 688 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Blacklegged tick picorna-like virus 2
9693942 9693942 PRJNA784979_S_NODE_8488_length_178_cov_1.418605_g8446_i0 PRJNA784979 8488 178 1.418605 2.5251169 Betacoronavirus pandemicum 3418604 Viruses Viruses 65.8 1.93e-6   NTclustered gi|2557643126|emb|OY672661.1| 2697049 g8446 i0 91.837 14.6292134831461 49 1 27 3 1 48 19268 19222 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 2604 65.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
12245128 12245128 PRJNA784979_S_NODE_3030_length_265_cov_448.064815_g2988_i0 PRJNA784979 3030 265 448.064815 1187.37175975 Betacoronavirus pandemicum 3418604 Viruses Viruses 117 8.47e-22   NTclustered gi|2165835426|emb|OV196492.1| 2697049 g2988 i0 94.805 31.2075471698113 77 1 28 2 191 265 138 63 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8270 117 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
12245158 12245158 PRJNA784979_S_NODE_7390_length_187_cov_1.289855_g7348_i0 PRJNA784979 7390 187 1.289855 2.41202885 Betacoronavirus pandemicum 3418604 Viruses Viruses 67.6 5.72e-7   NTclustered gi|2155043488|emb|OV016109.1| 2697049 g7348 i0 97.5 23.0802139037433 40 0 21 1 141 179 29944 29905 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 4316 67.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
17343786 17343786 PRJNA784979_S_NODE_4694_length_220_cov_1.941520_g4652_i0 PRJNA784979 4694 220 1.94152 4.271344 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 307 3.77e-79   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g4652 i0 92.891 0.959090909090909 211 15 96 0 10 220 6727 6517 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 211 307 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
18617138 18617138 PRJNA784979_S_NODE_9095_length_174_cov_0.944000_g9053_i0 PRJNA784979 9095 174 0.944 1.64256 Blacklegged tick picorna-like virus 2 2080259 Viruses Viruses 303 3.66e-78   NTclustered gi|1338075553|gb|MG647772.1| 2080259 g9053 i0 99.401 7.69540229885058 167 1 96 0 3 169 289 455 Blacklegged tick picorna-like virus 2 isolate RTS-11.3 hypothetical protein gene, partial cds blastn 1339 303 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Blacklegged tick picorna-like virus 2
22442859 22442859 PRJNA784979_S_NODE_14198_length_151_cov_2.009804_g14156_i0 PRJNA784979 14198 151 2.009804 3.03480404 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 202 1.1599999999999999e-47   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g14156 i0 93.382 0.900662251655629 136 9 90 0 1 136 6820 6955 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 136 202 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
28894447 28894447 PRJNA784979_S_NODE_4168_length_230_cov_1.491713_g4126_i0 PRJNA784979 4168 230 1.491713 3.4309399 Viruses 10239 Viruses Viruses 135 2.08e-35   NR URG14887.1 1530251 g4126 i0 90.3 3.75652173913043 72 7 93.9 0 223 8 222 293 URG14887.1 MAG: RNA dependent RNA polymerase, partial [Picornaviridae sp.] diamond 864 135 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
29588860 29588860 PRJNA784979_S_NODE_3670_length_243_cov_1.407216_g3628_i0 PRJNA784979 3670 243 1.407216 3.41953488 Viruses 10239 Viruses Viruses 129 1.2199999999999999e-32   NR URG14941.1 1530251 g3628 i0 77.2 1.95061728395062 79 18 97.5 0 241 5 45 123 URG14941.1 MAG: RNA dependent RNA polymerase, partial [Picornaviridae sp.] diamond 474 129 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;