contig_metadata
14 rows where bioproject = "PRJNA784979" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2488860 | 2488860 | PRJNA784979_S_NODE_12282_length_163_cov_0.894737_g12240_i0 | PRJNA784979 | 12282 | 163 | 0.894737 | 1.45842131 | Sorangium | 39643 | Bacteria | Bacteria | 152 | 1.3e-32 | NTclustered | gi|1566478966|gb|CP012672.1| | 56 | g12240 | i0 | 91.071 | 3.31288343558282 | 112 | 10 | 69 | 0 | 42 | 153 | 1962734 | 1962623 | Sorangium cellulosum strain So ce836 chromosome, complete genome | blastn | 540 | 152 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 9693948 | 9693948 | PRJNA784979_S_NODE_9608_length_170_cov_2.165289_g9566_i0 | PRJNA784979 | 9608 | 170 | 2.165289 | 3.6809913 | Minicystis rosea | 888845 | Bacteria | Bacteria | 189 | 1.04e-43 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g9566 | i0 | 95.763 | 122.088235294118 | 118 | 4 | 69 | 1 | 5 | 121 | 770755 | 770638 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 20755 | 189 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 17343778 | 17343778 | PRJNA784979_S_NODE_2054_length_323_cov_5.164234_g2012_i0 | PRJNA784979 | 2054 | 323 | 5.164234 | 16.68047582 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 372 | 2.05e-98 | NTclustered | gi|28395339|gb|AY190664.1| | 56 | g2012 | i0 | 87.975 | 165.006191950464 | 316 | 37 | 98 | 1 | 1 | 315 | 602 | 917 | Polyangium cellulosum strain So9881 clone 3 16S ribosomal RNA and 23S ribosomal RNA genes, partial sequence | blastn | 53297 | 372 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 19065057 | 19065057 | PRJNA784979_S_NODE_1795_length_353_cov_3.207237_g1753_i0 | PRJNA784979 | 1795 | 353 | 3.207237 | 11.32154661 | Sorangium | 39643 | Bacteria | Bacteria | 494 | 4.61e-135 | NTclustered | gi|1566478966|gb|CP012672.1| | 56 | g1753 | i0 | 92.464 | 135.373937677054 | 345 | 26 | 98 | 0 | 9 | 353 | 3690186 | 3690530 | Sorangium cellulosum strain So ce836 chromosome, complete genome | blastn | 47787 | 494 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 21615582 | 21615582 | PRJNA784979_S_NODE_2497_length_290_cov_5.195021_g2455_i0 | PRJNA784979 | 2497 | 290 | 5.195021 | 15.0655609 | Sorangium | 39643 | Bacteria | Bacteria | 316 | 8.62e-82 | NTclustered | gi|1566495190|gb|CP012670.1| | 56 | g2455 | i0 | 87.279 | 125.251724137931 | 283 | 29 | 96 | 7 | 9 | 286 | 2994552 | 2994272 | Sorangium cellulosum strain So ceGT47 chromosome, complete genome | blastn | 36323 | 318 | 0.993710691823899 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 27085316 | 27085316 | PRJNA784979_S_NODE_10942_length_166_cov_0.871795_g10900_i0 | PRJNA784979 | 10942 | 166 | 0.871795 | 1.4471797 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 57.8 | 6.56e-8 | NR | MET0790993.1 | 2268199 | g10900 | i0 | 47.3 | 0.993975903614458 | 55 | 29 | 99.4 | 0 | 2 | 166 | 344 | 398 | MET0790993.1 hypothetical protein [Polyangiaceae bacterium] | diamond | 165 | 57.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 27622483 | 27622483 | PRJNA784979_S_NODE_10944_length_166_cov_0.871795_g10902_i0 | PRJNA784979 | 10944 | 166 | 0.871795 | 1.4471797 | Archangium sp. | 1872627 | Bacteria | Bacteria | 68.6 | 7.67e-12 | NR | MDP1827653.1 | 1872627 | g10902 | i0 | 65.4 | 3.68674698795181 | 52 | 18 | 94 | 0 | 6 | 161 | 4 | 55 | MDP1827653.1 hypothetical protein [Archangium sp.] | diamond | 612 | 68.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium sp. | ||
| 27748895 | 27748895 | PRJNA784979_S_NODE_13284_length_161_cov_0.910714_g13242_i0 | PRJNA784979 | 13284 | 161 | 0.910714 | 1.46624954 | Archangiaceae bacterium | 2684409 | Bacteria | Bacteria | 49.7 | 4.35e-5 | NR | MBK7860774.1 | 2684409 | g13242 | i0 | 50 | 1.00621118012422 | 54 | 26 | 98.8 | 1 | 159 | 1 | 754 | 807 | MBK7860774.1 zinc-ribbon domain-containing protein [Archangiaceae bacterium] | diamond | 162 | 49.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangiaceae bacterium | |||
| 29358976 | 29358976 | PRJNA784979_S_NODE_12649_length_162_cov_1.433628_g12607_i0 | PRJNA784979 | 12649 | 162 | 1.433628 | 2.32247736 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 79.7 | 6.89e-16 | NR | MCC6809955.1 | 2026735 | g12607 | i0 | 72.3 | 0.87037037037037 | 47 | 13 | 87 | 0 | 159 | 19 | 226 | 272 | MCC6809955.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 141 | 79.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 30401675 | 30401675 | PRJNA784979_S_NODE_7013_length_191_cov_0.894366_g6971_i0 | PRJNA784979 | 7013 | 191 | 0.894366 | 1.70823906 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 41.2 | 0.0488 | NR | MEN0065938.1 | 2818507 | g6971 | i0 | 45.7 | 0.722513089005236 | 46 | 25 | 72.3 | 0 | 145 | 8 | 80 | 125 | MEN0065938.1 hypothetical protein [Myxococcota bacterium] | diamond | 138 | 41.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 31769625 | 31769625 | PRJNA784979_S_NODE_11477_length_165_cov_0.879310_g11435_i0 | PRJNA784979 | 11477 | 165 | 0.87931 | 1.4508615 | Myxococcia | 32015 | Bacteria | Bacteria | 110 | 1.7700000000000002e-26 | NR | MES1188455.1 | 2026763 | g11435 | i0 | 86.8 | 2.89090909090909 | 53 | 7 | 96.4 | 0 | 164 | 6 | 91 | 143 | MES1188455.1 M20/M25/M40 family metallo-hydrolase [Myxococcales bacterium] | diamond | 477 | 110 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 31918599 | 31918599 | PRJNA784979_S_NODE_7517_length_186_cov_1.145985_g7475_i0 | PRJNA784979 | 7517 | 186 | 1.145985 | 2.1315321 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 54.7 | 9.31e-7 | NR | RLB63939.1 | 2026735 | g7475 | i0 | 54.4 | 1.82258064516129 | 57 | 24 | 91.9 | 2 | 173 | 3 | 13 | 67 | RLB63939.1 MAG: hypothetical protein DRH08_10395 [Deltaproteobacteria bacterium] | diamond | 339 | 54.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 31981768 | 31981768 | PRJNA784979_S_NODE_10298_length_167_cov_0.864407_g10256_i0 | PRJNA784979 | 10298 | 167 | 0.864407 | 1.44355969 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 90.5 | 1.18e-21 | NR | MDO9018539.1 | 2026763 | g10256 | i0 | 82.1 | 1.0059880239521 | 56 | 9 | 98.8 | 1 | 3 | 167 | 57 | 112 | MDO9018539.1 cupredoxin domain-containing protein [Myxococcales bacterium] | diamond | 168 | 90.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 32393238 | 32393238 | PRJNA784979_S_NODE_12959_length_162_cov_0.902655_g12917_i0 | PRJNA784979 | 12959 | 162 | 0.902655 | 1.4623011 | Polyangiales bacterium | 3034171 | Bacteria | Bacteria | 48.5 | 1.07e-4 | NR | HET8940098.1 | 3034171 | g12917 | i0 | 52.9 | 2.81481481481481 | 51 | 24 | 94.4 | 0 | 161 | 9 | 154 | 204 | HET8940098.1 hypothetical protein [Polyangiales bacterium] | diamond | 456 | 48.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;