RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA784979" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA784979 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5041719 5041719 PRJNA784979_S_NODE_7904_length_182_cov_6.887218_g7862_i0 PRJNA784979 7904 182 6.887218 12.53473676 Anthozoa 6101 Cnidaria other_Eukaryota 263 6.57e-66   NTclustered gi|941488413|gb|KT852174.1| 6105 g7862 i0 100 78.021978021978 142 0 78 0 38 179 1089 948 Actinia tenebrosa isolate TEN 18S ribosomal RNA gene, partial sequence blastn 14200 263 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
16516260 16516260 PRJNA784979_S_NODE_10153_length_167_cov_1.550847_g10111_i0 PRJNA784979 10153 167 1.550847 2.58991449 Bivalvulida 35583 Cnidaria other_Eukaryota 56.5 0.001   NTclustered gi|87243841|gb|DQ377699.1| 371540 g10111 i0 100 6.26946107784431 30 0 18 0 64 93 857 886 Ceratomyxa sp. 2 IF-2006 from Notacanthus bonapartei small subunit ribosomal RNA gene, complete sequence blastn 1047 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Ceratomyxidae Ceratomyxa Ceratomyxa sp. 2 IF-2006
32614451 32614451 PRJNA784979_S_NODE_6320_length_198_cov_1.134228_g6278_i0 PRJNA784979 6320 198 1.134228 2.24577144 Nematostella vectensis 45351 Cnidaria other_Eukaryota 45.4 3.92e-4   NR EDO32471.1 45351 g6278 i0 59 0.590909090909091 39 16 59.1 0 7 123 50 88 EDO32471.1 predicted protein, partial [Nematostella vectensis] diamond 117 45.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;