RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA784979", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA784979 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26642073 26642073 PRJNA784979_S_NODE_12181_length_163_cov_1.307018_g12139_i0 PRJNA784979 12181 163 1.307018 2.13043934 Mycoplasmopsis arginini 2094 Bacteria Bacteria 112 8.53e-30   NR WP_282460248.1 2094 g12139 i0 100 0.975460122699387 53 0 97.5 0 161 3 88 140 WP_282460248.1 hypothetical protein, partial [Mycoplasmopsis arginini] diamond 159 112 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mycoplasmopsis Mycoplasmopsis arginini
32488279 32488279 PRJNA784979_S_NODE_6599_length_195_cov_0.958904_g6557_i0 PRJNA784979 6599 195 0.958904 1.8698628 Mycoplasmopsis arginini 2094 Bacteria Bacteria 117 6.059999999999999e-32   NR WP_282460037.1 2094 g6557 i0 100 0.815384615384615 53 0 81.5 0 193 35 102 154 WP_282460037.1 glycosyltransferase family A protein, partial [Mycoplasmopsis arginini] diamond 159 117 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mycoplasmopsis Mycoplasmopsis arginini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;