contig_metadata
8 rows where bioproject = "PRJNA784979", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7143993 | 7143993 | PRJNA784979_S_NODE_12626_length_162_cov_1.628319_g12584_i0 | PRJNA784979 | 12626 | 162 | 1.628319 | 2.63787678 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 267 | 4.419999999999999e-67 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g12584 | i0 | 96.855 | 89.1604938271605 | 159 | 5 | 98 | 0 | 1 | 159 | 1930 | 2088 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 14444 | 267 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 13519305 | 13519305 | PRJNA784979_S_NODE_11111_length_165_cov_1.405172_g11069_i0 | PRJNA784979 | 11111 | 165 | 1.405172 | 2.3185338 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 187 | 3.6199999999999985e-43 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g11069 | i0 | 88.387 | 31.9272727272727 | 155 | 18 | 94 | 0 | 1 | 155 | 3831353 | 3831507 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 5268 | 187 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 18617141 | 18617141 | PRJNA784979_S_NODE_9735_length_170_cov_0.735537_g9693_i0 | PRJNA784979 | 9735 | 170 | 0.735537 | 1.2504129 | Lacunisphaera limnophila | 1838286 | Bacteria | Bacteria | 274 | 2.79e-69 | NTclustered | gi|1070531674|gb|CP016094.1| | 1838286 | g9693 | i0 | 96.97 | 89.6647058823529 | 165 | 2 | 96 | 3 | 7 | 170 | 2557431 | 2557269 | Lacunisphaera limnophila strain IG16b, complete genome | blastn | 15243 | 274 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera limnophila | |
| 24992026 | 24992026 | PRJNA784979_S_NODE_7540_length_186_cov_0.912409_g7498_i0 | PRJNA784979 | 7540 | 186 | 0.912409 | 1.69708074 | Verrucomicrobium spinosum | 2736 | Bacteria | Bacteria | 220 | 4.12e-53 | NTclustered | gi|12583973|gb|AF245377.1| | 240016 | g7498 | i0 | 92.258 | 231.333333333333 | 155 | 12 | 83 | 0 | 24 | 178 | 928 | 774 | Verrucomicrobium spinosum 23S ribosomal RNA gene, partial sequence | blastn | 43028 | 220 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobium | Verrucomicrobium spinosum | |
| 30631479 | 30631479 | PRJNA784979_S_NODE_6793_length_193_cov_1.159722_g6751_i0 | PRJNA784979 | 6793 | 193 | 1.159722 | 2.23826346 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 64.7 | 3.28e-10 | NR | PYM11754.1 | 2026799 | g6751 | i0 | 48.4 | 7.72538860103627 | 62 | 32 | 96.4 | 0 | 192 | 7 | 181 | 242 | PYM11754.1 MAG: replicative DNA helicase, partial [Verrucomicrobiota bacterium] | diamond | 1491 | 64.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31570837 | 31570837 | PRJNA784979_S_NODE_12856_length_162_cov_0.902655_g12814_i0 | PRJNA784979 | 12856 | 162 | 0.902655 | 1.4623011 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 57.8 | 6.33e-8 | NR | MEW6303779.1 | 2026799 | g12814 | i0 | 51.9 | 1 | 54 | 25 | 100 | 1 | 162 | 1 | 310 | 362 | MEW6303779.1 SNF2-related protein [Verrucomicrobiota bacterium] | diamond | 162 | 57.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32298638 | 32298638 | PRJNA784979_S_NODE_12319_length_163_cov_0.894737_g12277_i0 | PRJNA784979 | 12319 | 163 | 0.894737 | 1.45842131 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 50.1 | 3.28e-5 | NR | MEO5720484.1 | 2201154 | g12277 | i0 | 46.2 | 2.83435582822086 | 52 | 26 | 92 | 1 | 8 | 157 | 10 | 61 | MEO5720484.1 class I SAM-dependent methyltransferase [Chthoniobacterales bacterium] | diamond | 462 | 50.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 32520016 | 32520016 | PRJNA784979_S_NODE_12739_length_162_cov_1.097345_g12697_i0 | PRJNA784979 | 12739 | 162 | 1.097345 | 1.7776989 | Nibricoccus aquaticus | 2576891 | Bacteria | Bacteria | 80.5 | 1.03e-16 | NR | WP_096055814.1 | 2576891 | g12697 | i0 | 71.7 | 0.981481481481482 | 53 | 12 | 98.1 | 1 | 159 | 1 | 25 | 74 | WP_096055814.1 hypothetical protein [Nibricoccus aquaticus] | diamond | 159 | 80.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus aquaticus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;