RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA784979", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA784979 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30370064 30370064 PRJNA784979_S_NODE_11752_length_164_cov_0.886957_g11710_i0 PRJNA784979 11752 164 0.886957 1.45460948 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 61.6 2.74e-9   NR MBA3817110.1 2052176 g11710 i0 46.2 1.9390243902439 52 28 95.1 0 1 156 247 298 MBA3817110.1 hypothetical protein [Parachlamydiaceae bacterium] diamond 318 61.6 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
31033394 31033394 PRJNA784979_S_NODE_2655_length_283_cov_1.645299_g2613_i0 PRJNA784979 2655 283 1.645299 4.65619617 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 187 1.06e-57   NR MFI0436135.1 2052176 g2613 i0 96.8 0.996466431095406 94 3 99.6 0 283 2 95 188 MFI0436135.1 terminase large subunit [Parachlamydiaceae bacterium] diamond 282 187 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;