contig_metadata
22 rows where bioproject = "PRJNA784979" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7143991 | 7143991 | PRJNA784979_S_NODE_12466_length_163_cov_0.894737_g12424_i0 | PRJNA784979 | 12466 | 163 | 0.894737 | 1.45842131 | Phycisphaerae bacterium | 2026778 | Bacteria | Bacteria | 118 | 1.71e-32 | NR | MFN9975414.1 | 2026778 | g12424 | i0 | 92.6 | 1.98773006134969 | 54 | 4 | 99.4 | 0 | 2 | 163 | 5 | 58 | MFN9975414.1 M20/M25/M40 family metallo-hydrolase [Phycisphaerae bacterium] | diamond | 324 | 118 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 7143993 | 7143993 | PRJNA784979_S_NODE_12626_length_162_cov_1.628319_g12584_i0 | PRJNA784979 | 12626 | 162 | 1.628319 | 2.63787678 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 267 | 4.419999999999999e-67 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g12584 | i0 | 96.855 | 89.1604938271605 | 159 | 5 | 98 | 0 | 1 | 159 | 1930 | 2088 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 14444 | 267 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 13519305 | 13519305 | PRJNA784979_S_NODE_11111_length_165_cov_1.405172_g11069_i0 | PRJNA784979 | 11111 | 165 | 1.405172 | 2.3185338 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 187 | 3.6199999999999985e-43 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g11069 | i0 | 88.387 | 31.9272727272727 | 155 | 18 | 94 | 0 | 1 | 155 | 3831353 | 3831507 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 5268 | 187 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 17791040 | 17791040 | PRJNA784979_S_NODE_11034_length_165_cov_1.974138_g10992_i0 | PRJNA784979 | 11034 | 165 | 1.974138 | 3.2573277 | Schlesneria | 656899 | Bacteria | Bacteria | 265 | 1.6299999999999998e-66 | NTclustered | gi|12583970|gb|AF245374.1|AF245374 | 149589 | g10992 | i0 | 96.835 | 110.018181818182 | 158 | 5 | 96 | 0 | 4 | 161 | 2151 | 2308 | Planctomycete str. 639 23S ribosomal RNA gene, partial sequence | blastn | 18153 | 265 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | planctomycete str. 639 | ||
| 18617141 | 18617141 | PRJNA784979_S_NODE_9735_length_170_cov_0.735537_g9693_i0 | PRJNA784979 | 9735 | 170 | 0.735537 | 1.2504129 | Lacunisphaera limnophila | 1838286 | Bacteria | Bacteria | 274 | 2.79e-69 | NTclustered | gi|1070531674|gb|CP016094.1| | 1838286 | g9693 | i0 | 96.97 | 89.6647058823529 | 165 | 2 | 96 | 3 | 7 | 170 | 2557431 | 2557269 | Lacunisphaera limnophila strain IG16b, complete genome | blastn | 15243 | 274 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera limnophila | |
| 24992004 | 24992004 | PRJNA784979_S_NODE_4280_length_228_cov_1.033520_g4238_i0 | PRJNA784979 | 4280 | 228 | 1.03352 | 2.3564256 | Frigoriglobus tundricola | 2774151 | Bacteria | Bacteria | 241 | 4.04e-59 | NTclustered | gi|1870286614|gb|CP053452.2| | 2774151 | g4238 | i0 | 91.477 | 77.469298245614 | 176 | 14 | 77 | 1 | 9 | 184 | 4960647 | 4960473 | Frigoriglobus tundricola strain PL17 chromosome, complete genome | blastn | 17663 | 241 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Frigoriglobus | Frigoriglobus tundricola | |
| 24992026 | 24992026 | PRJNA784979_S_NODE_7540_length_186_cov_0.912409_g7498_i0 | PRJNA784979 | 7540 | 186 | 0.912409 | 1.69708074 | Verrucomicrobium spinosum | 2736 | Bacteria | Bacteria | 220 | 4.12e-53 | NTclustered | gi|12583973|gb|AF245377.1| | 240016 | g7498 | i0 | 92.258 | 231.333333333333 | 155 | 12 | 83 | 0 | 24 | 178 | 928 | 774 | Verrucomicrobium spinosum 23S ribosomal RNA gene, partial sequence | blastn | 43028 | 220 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobium | Verrucomicrobium spinosum | |
| 26768761 | 26768761 | PRJNA784979_S_NODE_13101_length_161_cov_1.928571_g13059_i0 | PRJNA784979 | 13101 | 161 | 1.928571 | 3.10499931 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 68.2 | 1.3e-11 | NR | MDB5334893.1 | 2026779 | g13059 | i0 | 60 | 0.838509316770186 | 45 | 18 | 83.9 | 0 | 159 | 25 | 249 | 293 | MDB5334893.1 hypothetical protein [Planctomycetaceae bacterium] | diamond | 135 | 68.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 27496121 | 27496121 | PRJNA784979_S_NODE_9363_length_172_cov_1.243902_g9321_i0 | PRJNA784979 | 9363 | 172 | 1.243902 | 2.13951144 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 45.1 | 3.92e-4 | NR | MBL4698368.1 | 2052180 | g9321 | i0 | 88 | 0.436046511627907 | 25 | 3 | 43.6 | 0 | 76 | 2 | 21 | 45 | MBL4698368.1 hypothetical protein [Phycisphaerales bacterium] | diamond | 75 | 45.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 28696034 | 28696034 | PRJNA784979_S_NODE_10807_length_166_cov_0.871795_g10765_i0 | PRJNA784979 | 10807 | 166 | 0.871795 | 1.4471797 | Isosphaeraceae bacterium | 2691532 | Bacteria | Bacteria | 74.7 | 2.71e-15 | NR | HEU5118688.1 | 2691532 | g10765 | i0 | 87.2 | 0.704819277108434 | 39 | 5 | 70.5 | 0 | 162 | 46 | 101 | 139 | HEU5118688.1 hypothetical protein [Isosphaeraceae bacterium] | diamond | 117 | 74.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaeraceae bacterium | ||
| 28831316 | 28831316 | PRJNA784979_S_NODE_8148_length_181_cov_1.143939_g8106_i0 | PRJNA784979 | 8148 | 181 | 1.143939 | 2.07052959 | Bacteria | 2 | Bacteria | Bacteria | 97.8 | 1.17e-22 | NR | MDA1178798.1 | 2026780 | g8106 | i0 | 70.2 | 3.77900552486188 | 57 | 17 | 94.5 | 0 | 181 | 11 | 72 | 128 | MDA1178798.1 site-specific DNA-methyltransferase [Planctomycetota bacterium] | diamond | 684 | 98.6 | 0.991886409736308 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 29453293 | 29453293 | PRJNA784979_S_NODE_12470_length_163_cov_0.894737_g12428_i0 | PRJNA784979 | 12470 | 163 | 0.894737 | 1.45842131 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 106 | 1.4e-26 | NR | MEQ1895140.1 | 2026780 | g12428 | i0 | 96.3 | 0.993865030674847 | 54 | 2 | 99.4 | 0 | 2 | 163 | 81 | 134 | MEQ1895140.1 sulfatase-like hydrolase/transferase [Planctomycetota bacterium] | diamond | 162 | 106 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 29548159 | 29548159 | PRJNA784979_S_NODE_12170_length_163_cov_1.333333_g12128_i0 | PRJNA784979 | 12170 | 163 | 1.333333 | 2.17333279 | uncultured Gimesia sp. | 1678688 | Bacteria | Bacteria | 48.5 | 1.08e-4 | NR | WP_339736255.1 | 1678688 | g12128 | i0 | 51 | 0.901840490797546 | 49 | 24 | 90.2 | 0 | 152 | 6 | 95 | 143 | WP_339736255.1 AAA family ATPase [uncultured Gimesia sp.] | diamond | 147 | 48.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Gimesia | uncultured Gimesia sp. | |
| 29642733 | 29642733 | PRJNA784979_S_NODE_13230_length_161_cov_1.223214_g13188_i0 | PRJNA784979 | 13230 | 161 | 1.223214 | 1.96937454 | Gemmata sp. SH-PL17 | 1630693 | Bacteria | Bacteria | 42.7 | 0.0119 | NR | WP_082842093.1 | 1630693 | g13188 | i0 | 46.9 | 0.91304347826087 | 49 | 26 | 91.3 | 0 | 2 | 148 | 9 | 57 | WP_082842093.1 RecB family exonuclease [Gemmata sp. SH-PL17] | diamond | 147 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata sp. SH-PL17 | |
| 30370064 | 30370064 | PRJNA784979_S_NODE_11752_length_164_cov_0.886957_g11710_i0 | PRJNA784979 | 11752 | 164 | 0.886957 | 1.45460948 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 61.6 | 2.74e-9 | NR | MBA3817110.1 | 2052176 | g11710 | i0 | 46.2 | 1.9390243902439 | 52 | 28 | 95.1 | 0 | 1 | 156 | 247 | 298 | MBA3817110.1 hypothetical protein [Parachlamydiaceae bacterium] | diamond | 318 | 61.6 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 30401671 | 30401671 | PRJNA784979_S_NODE_10313_length_167_cov_0.864407_g10271_i0 | PRJNA784979 | 10313 | 167 | 0.864407 | 1.44355969 | Pirellulales bacterium | 2715253 | Bacteria | Bacteria | 70.5 | 2.19e-12 | NR | MEX2113015.1 | 2715253 | g10271 | i0 | 62.7 | 0.916167664670659 | 51 | 19 | 91.6 | 0 | 159 | 7 | 661 | 711 | MEX2113015.1 choice-of-anchor L domain-containing protein [Pirellulales bacterium] | diamond | 153 | 70.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulales bacterium | |||
| 30631479 | 30631479 | PRJNA784979_S_NODE_6793_length_193_cov_1.159722_g6751_i0 | PRJNA784979 | 6793 | 193 | 1.159722 | 2.23826346 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 64.7 | 3.28e-10 | NR | PYM11754.1 | 2026799 | g6751 | i0 | 48.4 | 7.72538860103627 | 62 | 32 | 96.4 | 0 | 192 | 7 | 181 | 242 | PYM11754.1 MAG: replicative DNA helicase, partial [Verrucomicrobiota bacterium] | diamond | 1491 | 64.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31033394 | 31033394 | PRJNA784979_S_NODE_2655_length_283_cov_1.645299_g2613_i0 | PRJNA784979 | 2655 | 283 | 1.645299 | 4.65619617 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 187 | 1.06e-57 | NR | MFI0436135.1 | 2052176 | g2613 | i0 | 96.8 | 0.996466431095406 | 94 | 3 | 99.6 | 0 | 283 | 2 | 95 | 188 | MFI0436135.1 terminase large subunit [Parachlamydiaceae bacterium] | diamond | 282 | 187 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 31159133 | 31159133 | PRJNA784979_S_NODE_11355_length_165_cov_0.879310_g11313_i0 | PRJNA784979 | 11355 | 165 | 0.87931 | 1.4508615 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 63.2 | 8.19e-10 | NR | MFT3785234.1 | 2876886 | g11313 | i0 | 56.6 | 0.963636363636364 | 53 | 23 | 96.4 | 0 | 162 | 4 | 216 | 268 | MFT3785234.1 hypothetical protein [Tepidisphaeraceae bacterium] | diamond | 159 | 63.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 31570837 | 31570837 | PRJNA784979_S_NODE_12856_length_162_cov_0.902655_g12814_i0 | PRJNA784979 | 12856 | 162 | 0.902655 | 1.4623011 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 57.8 | 6.33e-8 | NR | MEW6303779.1 | 2026799 | g12814 | i0 | 51.9 | 1 | 54 | 25 | 100 | 1 | 162 | 1 | 310 | 362 | MEW6303779.1 SNF2-related protein [Verrucomicrobiota bacterium] | diamond | 162 | 57.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32298638 | 32298638 | PRJNA784979_S_NODE_12319_length_163_cov_0.894737_g12277_i0 | PRJNA784979 | 12319 | 163 | 0.894737 | 1.45842131 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 50.1 | 3.28e-5 | NR | MEO5720484.1 | 2201154 | g12277 | i0 | 46.2 | 2.83435582822086 | 52 | 26 | 92 | 1 | 8 | 157 | 10 | 61 | MEO5720484.1 class I SAM-dependent methyltransferase [Chthoniobacterales bacterium] | diamond | 462 | 50.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 32520016 | 32520016 | PRJNA784979_S_NODE_12739_length_162_cov_1.097345_g12697_i0 | PRJNA784979 | 12739 | 162 | 1.097345 | 1.7776989 | Nibricoccus aquaticus | 2576891 | Bacteria | Bacteria | 80.5 | 1.03e-16 | NR | WP_096055814.1 | 2576891 | g12697 | i0 | 71.7 | 0.981481481481482 | 53 | 12 | 98.1 | 1 | 159 | 1 | 25 | 74 | WP_096055814.1 hypothetical protein [Nibricoccus aquaticus] | diamond | 159 | 80.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus aquaticus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;