RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA784979", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA784979 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27148032 27148032 PRJNA784979_S_NODE_12302_length_163_cov_0.894737_g12260_i0 PRJNA784979 12302 163 0.894737 1.45842131 Ignavibacteria bacterium 2053306 Bacteria Bacteria 94.7 1e-22   NR MBD1207866.1 2053306 g12260 i0 98.1 0.993865030674847 54 1 99.4 0 2 163 77 130 MBD1207866.1 hypothetical protein [Ignavibacteria bacterium] diamond 162 94.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
30338461 30338461 PRJNA784979_S_NODE_5272_length_211_cov_1.209877_g5230_i0 PRJNA784979 5272 211 1.209877 2.55284047 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 53.5 3.72e-6   NR MBK7380680.1 2049428 g5230 i0 35.6 0.838862559241706 59 38 83.9 0 33 209 560 618 MBK7380680.1 hypothetical protein [Ignavibacteriales bacterium] diamond 177 53.5 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;