RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA784979", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 2 ✖

tax_clade 1

  • Amoebozoa · 2 ✖

bioproject 1

  • PRJNA784979 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2488924 2488924 PRJNA784979_S_NODE_8962_length_174_cov_2.256000_g8920_i0 PRJNA784979 8962 174 2.256 3.92544 Protostelium 472930 Evosea other_Eukaryota 313 6.079999999999998e-81   NTclustered gi|262262921|gb|FJ766464.1| 472931 g8920 i0 99.422 361.64367816092 173 0 99 1 1 173 1331 1502 Protostelium mycophagum strain KA-T15-2 small subunit ribosomal RNA gene, partial sequence blastn 62926 313 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
19065139 19065139 PRJNA784979_S_NODE_9455_length_171_cov_2.122951_g9413_i0 PRJNA784979 9455 171 2.122951 3.63024621 Protostelium 472930 Evosea other_Eukaryota 296 5.99e-76   NTclustered gi|262262921|gb|FJ766464.1| 472931 g9413 i0 98.802 6.55555555555556 167 0 98 1 1 167 833 669 Protostelium mycophagum strain KA-T15-2 small subunit ribosomal RNA gene, partial sequence blastn 1121 296 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;