contig_metadata
11 rows where bioproject = "PRJNA784298" and tax_phylum = "Verrucomicrobiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 765288 | 765288 | PRJNA784298_P_NODE_14361_length_329_cov_1.703125_g14160_i0 | PRJNA784298 | 14361 | 329 | 1.703125 | 5.60328125 | Prosthecobacter fusiformis | 48464 | Bacteria | Bacteria | 551 | 2.499999999999999e-152 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g14160 | i0 | 96.951 | 271.109422492401 | 328 | 10 | 99 | 0 | 2 | 329 | 737 | 410 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 89195 | 551 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 6317254 | 6317254 | PRJNA784298_P_NODE_24305_length_249_cov_0.875000_g24104_i0 | PRJNA784298 | 24305 | 249 | 0.875 | 2.17875 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 138 | 2.11e-40 | NR | MEW6156793.1 | 2026799 | g24104 | i0 | 87.7 | 5.27710843373494 | 73 | 9 | 88 | 0 | 219 | 1 | 1 | 73 | MEW6156793.1 co-chaperone GroES [Verrucomicrobiota bacterium] | diamond | 1314 | 138 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 10141926 | 10141926 | PRJNA784298_P_NODE_8008_length_445_cov_1.870968_g7807_i0 | PRJNA784298 | 8008 | 445 | 1.870968 | 8.3258076 | Fontisphaera | 3050007 | Bacteria | Bacteria | 403 | 1.0299999999999996e-107 | NTclustered | gi|2621704341|emb|OY760937.1| | 2499141 | g7807 | i0 | 87.052 | 82.8179775280899 | 363 | 39 | 80 | 6 | 1 | 357 | 3990513 | 3990873 | MAG: Verrucomicrobiae bacterium isolate 066a7682-a1ac-48de-8761-1470dc9e5c3e genome assembly, chromosome: 1 | blastn | 36854 | 403 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 17343608 | 17343608 | PRJNA784298_P_NODE_23774_length_251_cov_0.865169_g23573_i0 | PRJNA784298 | 23774 | 251 | 0.865169 | 2.17157419 | Opitutia bacterium | 2026771 | Bacteria | Bacteria | 87.4 | 7.81e-18 | NR | MBI3884161.1 | 2026771 | g23573 | i0 | 59 | 0.99203187250996006 | 83 | 29 | 99.2 | 2 | 249 | 1 | 146 | 223 | MBI3884161.1 U32 family peptidase [Opitutia bacterium] | diamond | 249 | 87.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutia bacterium | ||||
| 24991818 | 24991818 | PRJNA784298_P_NODE_24100_length_250_cov_0.870056_g23899_i0 | PRJNA784298 | 24100 | 250 | 0.870056 | 2.17514 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 324 | 4.35e-84 | NTclustered | gi|2874253768|emb|OY969715.1| | 412056 | g23899 | i0 | 90 | 98.896 | 250 | 25 | 100 | 0 | 1 | 250 | 914745 | 914994 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01916.bin.1.1 genome assembly, chromosome: 1 | blastn | 24724 | 324 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 27274923 | 27274923 | PRJNA784298_P_NODE_12923_length_347_cov_1.854015_g12722_i0 | PRJNA784298 | 12923 | 347 | 1.854015 | 6.43343205 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 132 | 1.96e-35 | NR | RYD62014.1 | 2026800 | g12722 | i0 | 55.3 | 1.96253602305476 | 114 | 48 | 98.6 | 1 | 4 | 345 | 5 | 115 | RYD62014.1 MAG: hypothetical protein EOP83_15680 [Verrucomicrobiaceae bacterium] | diamond | 681 | 132 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 27306634 | 27306634 | PRJNA784298_P_NODE_27923_length_228_cov_2.896774_g27722_i0 | PRJNA784298 | 27923 | 228 | 2.896774 | 6.60464472 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 86.3 | 7.58e-18 | NR | HKP04302.1 | 2201154 | g27722 | i0 | 54.7 | 2.96052631578947 | 75 | 34 | 98.7 | 0 | 2 | 226 | 155 | 229 | HKP04302.1 DUF2971 domain-containing protein [Chthoniobacterales bacterium] | diamond | 675 | 86.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 30717019 | 30717019 | PRJNA784298_P_NODE_24014_length_250_cov_0.870056_g23813_i0 | PRJNA784298 | 24014 | 250 | 0.870056 | 2.17514 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 78.6 | 4.32e-15 | NR | MBX7120636.1 | 2006848 | g23813 | i0 | 47.7 | 1.032 | 86 | 40 | 99.6 | 2 | 2 | 250 | 43 | 126 | MBX7120636.1 alpha/beta hydrolase [Opitutaceae bacterium] | diamond | 258 | 78.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 31791812 | 31791812 | PRJNA784298_P_NODE_23297_length_253_cov_1.711111_g23096_i0 | PRJNA784298 | 23297 | 253 | 1.711111 | 4.32911083 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 64.3 | 3.29e-10 | NR | WP_150107388.1 | 1032527 | g23096 | i0 | 53 | 0.782608695652174 | 66 | 30 | 78.3 | 1 | 199 | 2 | 71 | 135 | WP_150107388.1 hypothetical protein [Pedosphaera parvula] | diamond | 198 | 64.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 32013485 | 32013485 | PRJNA784298_P_NODE_22038_length_261_cov_4.563830_g21837_i0 | PRJNA784298 | 22038 | 261 | 4.56383 | 11.9115963 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 79.3 | 4e-17 | NR | NBB80421.1 | 2026799 | g21837 | i0 | 50 | 0.850574712643678 | 74 | 37 | 85.1 | 0 | 226 | 5 | 1 | 74 | NBB80421.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 222 | 79.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32677173 | 32677173 | PRJNA784298_P_NODE_16800_length_302_cov_2.816594_g16599_i0 | PRJNA784298 | 16800 | 302 | 2.816594 | 8.50611388 | Rubritalea sp. | 2109375 | Bacteria | Bacteria | 62.8 | 6.24e-9 | NR | MEZ7957371.1 | 2109375 | g16599 | i0 | 42.5 | 1.70860927152318 | 73 | 34 | 69.5 | 2 | 210 | 1 | 106 | 173 | MEZ7957371.1 DUF2971 domain-containing protein [Rubritalea sp.] | diamond | 516 | 62.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Rubritaleaceae | Rubritalea | Rubritalea sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;