RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA784298", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Nitrososphaerota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA784298 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7143877 7143877 PRJNA784298_P_NODE_27626_length_232_cov_2.106918_g27425_i0 PRJNA784298 27626 232 2.106918 4.88804976 Candidatus Nitrosotenuis aquarius 1846278 Archaea Archaea 363 8.439999999999997e-96   NTclustered gi|1279207014|gb|CP024808.1| 1846278 g27425 i0 94.828 18.7068965517241 232 12 100 0 1 232 1535221 1534990 Candidatus Nitrosotenuis aquarius strain AQ6F chromosome, complete genome blastn 4340 363 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis aquarius
31033384 31033384 PRJNA784298_P_NODE_27695_length_231_cov_2.196203_g27494_i0 PRJNA784298 27695 231 2.196203 5.07322893 Nitrososphaerota archaeon 2026795 Archaea Archaea 56.2 2.41e-7   NR NMJ87995.1 2026795 g27494 i0 43.8 1.83116883116883 73 31 83.1 4 40 231 5 76 NMJ87995.1 hypothetical protein [Nitrososphaerota archaeon] diamond 423 56.2 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
32897608 32897608 PRJNA784298_P_NODE_11700_length_366_cov_1.255973_g11499_i0 PRJNA784298 11700 366 1.255973 4.59686118 Nitrosopumilaceae archaeon 2202732 Archaea Archaea 48.9 2.95e-4   NR MDX1532656.1 2202732 g11499 i0 31.4 0.704918032786885 86 57 70.5 1 88 345 59 142 MDX1532656.1 hypothetical protein [Nitrosopumilaceae archaeon] diamond 258 48.9 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae   Nitrosopumilaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;