RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJNA784298" and tax_phylum = "Minisyncoccota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA784298 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28853500 28853500 PRJNA784298_P_NODE_21608_length_264_cov_2.073298_g21407_i0 PRJNA784298 21608 264 2.073298 5.47350672 Minisyncoccota bacterium 2053589 Bacteria Bacteria 76.6 5.95e-14   NR MFA5086793.1 2053589 g21407 i0 67.2 0.761363636363636 67 19 76.1 1 261 61 518 581 MFA5086793.1 lamin tail domain-containing protein [Candidatus Paceibacterota bacterium] diamond 201 76.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29295717 29295717 PRJNA784298_P_NODE_10689_length_383_cov_2.177419_g10488_i0 PRJNA784298 10689 383 2.177419 8.33951477 Minisyncoccota bacterium 2053589 Bacteria Bacteria 59.3 1.21e-7   NR MFA5841638.1 2053589 g10488 i0 33.3 1.76240208877285 111 63 81.5 2 50 361 115 221 MFA5841638.1 orotate phosphoribosyltransferase [Candidatus Paceibacterota bacterium] diamond 675 59.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29746779 29746779 PRJNA784298_P_NODE_21310_length_266_cov_2.585492_g21109_i0 PRJNA784298 21310 266 2.585492 6.87740872 Bacteria 2 Bacteria Bacteria 63.2 2.78e-9   NR MBP6060469.1 2053589 g21109 i0 50.8 1.47744360902256 59 29 66.5 0 84 260 4 62 MBP6060469.1 DNA polymerase III subunit gamma/tau [Candidatus Paceibacterota bacterium] diamond 393 63.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29800825 29800825 PRJNA784298_P_NODE_24511_length_248_cov_1.622857_g24310_i0 PRJNA784298 24511 248 1.622857 4.02468536 Minisyncoccota bacterium 2053589 Bacteria Bacteria 65.9 2.81e-10   NR HEY0907915.1 2053589 g24310 i0 56.4 0.665322580645161 55 24 66.5 0 168 4 24 78 HEY0907915.1 ABC transporter ATP-binding protein [Candidatus Paceibacterota bacterium] diamond 165 65.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30875111 30875111 PRJNA784298_P_NODE_26934_length_241_cov_0.916667_g26733_i0 PRJNA784298 26934 241 0.916667 2.20916747 Minisyncoccota bacterium 2053589 Bacteria Bacteria 56.6 4.44e-7   NR MFA5207893.1 2053589 g26733 i0 42 1.00829875518672 81 44 98.3 2 239 3 331 410 MFA5207893.1 DUF333 domain-containing protein [Candidatus Paceibacterota bacterium] diamond 243 56.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32677180 32677180 PRJNA784298_P_NODE_2120_length_875_cov_5.460100_g1944_i0 PRJNA784298 2120 875 5.4601 47.775875 Candidatus Minisyncoccus archaeophilus 3238481 Bacteria Bacteria 69.3 5.23e-9   NR WP_412732666.1 3238481 g1944 i0 38.7 1.14857142857143 124 61 41.1 5 857 498 1355 1466 WP_412732666.1 hypothetical protein [Minisyncoccus archaeophilus] diamond 1005 69.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Minisyncoccales Minisyncoccaceae Minisyncoccus Minisyncoccus archaeiphilus
32897609 32897609 PRJNA784298_P_NODE_12240_length_357_cov_3.028169_g12039_i0 PRJNA784298 12240 357 3.028169 10.81056333 Minisyncoccota bacterium 2053589 Bacteria Bacteria 56.2 1.55e-6   NR HRH25143.1 2053589 g12039 i0 30.3 0.915966386554622 109 75 91.6 1 349 23 132 239 HRH25143.1 DUF3298 domain-containing protein [Candidatus Paceibacterota bacterium] diamond 327 56.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;