RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA784298" and tax_phylum = "Candidatus Peregrinibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Peregrinibacteriota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA784298 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9693699 9693699 PRJNA784298_P_NODE_208_length_2661_cov_8.548300_g171_i0 PRJNA784298 208 2661 8.5483 227.470263 Candidatus Peribacteraceae bacterium 2735830 Bacteria Bacteria 545 1.1599999999999994e-183   NR MCK5020147.1 2735830 g171 i0 62.3 0.487034949267193 432 160 48.6 2 1324 32 5 434 MCK5020147.1 hypothetical protein [Candidatus Peribacteraceae bacterium] diamond 1296 545 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales     Candidatus Peribacteraceae bacterium
24991785 24991785 PRJNA784298_P_NODE_21440_length_265_cov_3.739583_g21239_i0 PRJNA784298 21440 265 3.739583 9.90989495 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 182 2.96e-41   NTclustered gi|2258833497|gb|CP060226.1| 2053688 g21239 i0 82.524 3.40754716981132 206 36 78 0 14 219 237884 237679 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-10 chromosome, complete genome blastn 903 182 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
27433125 27433125 PRJNA784298_P_NODE_2243_length_851_cov_2.190231_g2065_i0 PRJNA784298 2243 851 2.190231 18.63886581 Candidatus Peribacteraceae bacterium 2735830 Bacteria Bacteria 268 1.23e-77   NR MCK5020030.1 2735830 g2065 i0 49.5 0.990599294947121 281 138 98 3 18 851 664 943 MCK5020030.1 DUF4815 domain-containing protein [Candidatus Peribacteraceae bacterium] diamond 843 268 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales     Candidatus Peribacteraceae bacterium
28862857 28862857 PRJNA784298_P_NODE_18428_length_288_cov_2.102326_g18227_i0 PRJNA784298 18428 288 2.102326 6.05469888 Bacteria 2 Bacteria Bacteria 191 4.57e-57   NR MCA9378390.1 2030811 g18227 i0 88.4 6.92708333333333 95 11 99 0 286 2 193 287 MCA9378390.1 hypothetical protein [Candidatus Peregrinibacteria bacterium] diamond 1995 192 0.994791666666667 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium
31064952 31064952 PRJNA784298_P_NODE_3875_length_646_cov_3.722513_g3678_i0 PRJNA784298 3875 646 3.722513 24.04743398 Candidatus Peribacteraceae bacterium 2735830 Bacteria Bacteria 55.8 1.51e-6   NR MCK5020153.1 2735830 g3678 i0 39.5 0.775541795665635 81 49 37.6 0 384 142 3 83 MCK5020153.1 hypothetical protein [Candidatus Peribacteraceae bacterium] diamond 501 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales     Candidatus Peribacteraceae bacterium
32045181 32045181 PRJNA784298_P_NODE_18758_length_285_cov_3.396226_g18557_i0 PRJNA784298 18758 285 3.396226 9.6792441 Candidatus Peribacteraceae bacterium 2735830 Bacteria Bacteria 87.4 1.13e-17   NR MCK5019999.1 2735830 g18557 i0 60.3 0.715789473684211 68 26 70.5 1 2 202 451 518 MCK5019999.1 DEAD/DEAH box helicase family protein [Candidatus Peribacteraceae bacterium] diamond 204 87.4 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales     Candidatus Peribacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;