RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA784298", tax_kingdom = "Orthornavirae" and tax_phylum = "Kitrinoviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 4 ✖

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA784298 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21167873 21167873 PRJNA784298_P_NODE_21157_length_267_cov_2.293814_g20956_i0 PRJNA784298 21157 267 2.293814 6.12448338 Tombusviridae sp. 2583950 Viruses Viruses 268 2.23e-67   NTclustered gi|2171146054|gb|MZ218543.1| 2583950 g20956 i0 86.4 0.936329588014981 250 28 92 6 22 267 251 4 MAG: Tombusviridae sp. isolate 277-k141_9923 genomic sequence blastn 250 268 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Tombusviridae sp.
24991925 24991925 PRJNA784298_P_NODE_80_length_4000_cov_4.950089_g64_i0 PRJNA784298 80 4000 4.950089 198.00356 Tolivirales sp. 2809914 Viruses Viruses 1074 0   NR WRQ65448.1 2809914 g64 i0 72 0.546 728 201 54.5 3 3661 1481 73 798 WRQ65448.1 polyprotein, partial [Tolivirales sp.] diamond 2184 1074 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
27306619 27306619 PRJNA784298_P_NODE_18623_length_287_cov_1.079439_g18422_i0 PRJNA784298 18623 287 1.079439 3.09798993 Grapevine wood holobiome associated deltaflexivirus 2 3384488 Viruses Viruses 50.4 1.14e-4   NR XLE34831.1 3384488 g18422 i0 41.1 0.585365853658537 56 33 58.5 0 7 174 196 251 XLE34831.1 hypothetical protein [Grapevine wood holobiome associated deltaflexivirus 2] diamond 168 50.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae Deltaflexivirus Grapevine wood holobiome associated deltaflexivirus 2
28001400 28001400 PRJNA784298_P_NODE_25185_length_246_cov_0.890173_g24984_i0 PRJNA784298 25185 246 0.890173 2.18982558 Sichuan sediment alphaendornavirus 23 2824212 Viruses Viruses 68.2 4.32e-11   NR QYF50107.1 2824212 g24984 i0 45 0.975609756097561 80 43 96.3 1 240 4 467 546 QYF50107.1 MAG: polyprotein, partial [Sichuan sediment alphaendornavirus 23] diamond 240 68.2 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Sichuan sediment alphaendornavirus 23

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;