RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA784298", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 7 ✖

tax_kingdom 1

  • Bacillati · 7 ✖

bioproject 1

  • PRJNA784298 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8418510 8418510 PRJNA784298_P_NODE_26227_length_243_cov_0.905882_g26026_i0 PRJNA784298 26227 243 0.905882 2.20129326 Capsulimonas corticalis 2219043 Bacteria Bacteria 246 9.36e-61   NTclustered gi|2240447379|dbj|AP025739.1| 2219043 g26026 i0 89.637 67.4074074074074 193 20 79 0 51 243 595268 595460 Capsulimonas corticalis AX-7 DNA, complete genome blastn 16380 246 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas corticalis
10141823 10141823 PRJNA784298_P_NODE_2108_length_878_cov_4.315528_g1933_i0 PRJNA784298 2108 878 4.315528 37.89033584 Fimbriimonas 1005038 Bacteria Bacteria 1112 0   NTclustered gi|663071213|gb|CP007139.1| 661478 g1933 i0 90.27 228.0569476082 853 79 97 3 27 878 28249 29098 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 200234 1112 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
15241600 15241600 PRJNA784298_P_NODE_17792_length_293_cov_29.472727_g17591_i0 PRJNA784298 17792 293 29.472727 86.35509011 Armatimonadota 67819 Bacteria Bacteria 279 1.14e-70   NTclustered gi|1996217993|dbj|AP021858.1| 2608984 g17591 i0 84.429 226.699658703072 289 39 98 6 1 286 37093 37378 Candidatus Nitrosymbiomonas proteolyticus DNA, complete genome blastn 66423 279 1 Bacteria   Bacillati Armatimonadota       Candidatus Nitrosymbiomonas Candidatus Nitrosymbiomonas proteolyticus
18616816 18616816 PRJNA784298_P_NODE_13335_length_342_cov_1.501859_g13134_i0 PRJNA784298 13335 342 1.501859 5.13635778 Fimbriimonas sp. 1936159 Bacteria Bacteria 396 1.3e-105   NTclustered gi|2778022393|emb|OZ123194.1| 1936159 g13134 i0 88.024 258.932748538012 334 40 98 0 7 340 1688875 1688542 MAG: Fimbriimonas sp. isolate MsE-30jul19-LR-01 genome assembly, chromosome: 1 blastn 88555 396 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
21615493 21615493 PRJNA784298_P_NODE_28557_length_203_cov_4.930769_g28356_i0 PRJNA784298 28557 203 4.930769 10.00946107 Armatimonadota 67819 Bacteria Bacteria 250 5.85e-62   NTclustered gi|1996217993|dbj|AP021858.1| 2608984 g28356 i0 90.476 14.0886699507389 189 18 93 0 1 189 36061 35873 Candidatus Nitrosymbiomonas proteolyticus DNA, complete genome blastn 2860 250 1 Bacteria   Bacillati Armatimonadota       Candidatus Nitrosymbiomonas Candidatus Nitrosymbiomonas proteolyticus
22442555 22442555 PRJNA784298_P_NODE_12298_length_356_cov_4.067138_g12097_i0 PRJNA784298 12298 356 4.067138 14.47901128 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 425 1.7199999999999998e-114   NTclustered gi|663071213|gb|CP007139.1| 661478 g12097 i0 90.06 67.252808988764 332 28 92 5 3 331 29490 29819 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 23942 425 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
27938157 27938157 PRJNA784298_P_NODE_21065_length_268_cov_1.456410_g20864_i0 PRJNA784298 21065 268 1.45641 3.9031788 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 82.4 2.2e-16   NR MCS7190000.1 2682145 g20864 i0 75.5 0.548507462686567 49 12 54.9 0 148 2 15 63 MCS7190000.1 Dam family site-specific DNA-(adenine-N6)-methyltransferase [Fimbriimonadales bacterium] diamond 147 82.4 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;