RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA784298", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 12 ✖

tax_clade 1

  • Sar · 12 ✖

bioproject 1

  • PRJNA784298 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2041390 2041390 PRJNA784298_P_NODE_7922_length_447_cov_4.318182_g7721_i0 PRJNA784298 7922 447 4.318182 19.30227354 Tetrahymena sp. KGE15 1200497 SAR_Eukaryotes SAR_Eukaryotes 793 0   NTclustered gi|523704203|emb|HE861887.1| 1200497 g7721 i0 98.661 81.1834451901566 448 5 100 1 1 447 611 164 Tetrahymena sp. KGE15 partial 28S rRNA gene, strain KGE15 blastn 36289 793 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena sp. KGE15
8418555 8418555 PRJNA784298_P_NODE_3647_length_668_cov_2.438655_g3451_i0 PRJNA784298 3647 668 2.438655 16.2902154 Tetrahymena pigmentosa 5907 SAR_Eukaryotes SAR_Eukaryotes 966 0   NTclustered gi|114329902|ref|NC_008339.1| 5907 g3451 i0 92.836 62.2065868263473 670 43 100 4 1 668 1965 1299 Tetrahymena pigmentosa mitochondrion, complete genome blastn 41554 966 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pigmentosa
12244951 12244951 PRJNA784298_P_NODE_2310_length_837_cov_5.560209_g2130_i0 PRJNA784298 2310 837 5.560209 46.53894933 Tetrahymena pigmentosa 5907 SAR_Eukaryotes SAR_Eukaryotes 1338 0   NTclustered gi|114329902|ref|NC_008339.1| 5907 g2130 i0 95.59 27.5925925925926 839 29 100 7 1 837 2781 1949 Tetrahymena pigmentosa mitochondrion, complete genome blastn 23095 1338 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pigmentosa
13519192 13519192 PRJNA784298_P_NODE_26851_length_241_cov_0.916667_g26650_i0 PRJNA784298 26851 241 0.916667 2.20916747 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 147 3.46e-39   NR XP_001031773.1 312017 g26650 i0 93.7 0.983402489626556 79 5 98.3 0 239 3 203 281 XP_001031773.1 methylthioribose kinase [Tetrahymena thermophila SB210] diamond 237 147 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
17343500 17343500 PRJNA784298_P_NODE_14334_length_329_cov_3.851562_g14133_i0 PRJNA784298 14334 329 3.851562 12.671638980000001 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 497 3.3099999999999994e-136   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g14133 i0 93.939 37.9088145896657 330 18 100 2 1 329 358 30 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 12472 497 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
19892065 19892065 PRJNA784298_P_NODE_1136_length_1222_cov_5.310705_g1010_i0 PRJNA784298 1136 1222 5.310705 64.8968151 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 1670 0   NTclustered gi|11466252|ref|NC_000862.1| 5908 g1010 i0 91.368 58.8011456628478 1228 95 99 10 2 1222 32604 33827 Tetrahymena pyriformis mitochondrion, complete genome blastn 71855 1670 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
19892105 19892105 PRJNA784298_P_NODE_15436_length_317_cov_1.110656_g15235_i0 PRJNA784298 15436 317 1.110656 3.52077952 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 337 7.319999999999998e-88   NTclustered gi|118379397|ref|XM_001022864.1| 312017 g15235 i0 85.893 1.00630914826498 319 41 100 4 1 317 168 484 Tetrahymena thermophila SB210 60S ribosomal protein L13 partial mRNA blastn 319 337 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
23718166 23718166 PRJNA784298_P_NODE_20839_length_269_cov_17.653061_g20638_i0 PRJNA784298 20839 269 17.653061 47.48673409 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 357 4.66e-94   NTclustered gi|829158923|ref|XM_012796529.1| 312017 g20638 i0 96.729 3.46468401486989 214 7 80 0 9 222 50 263 Tetrahymena thermophila SB210 hypothetical protein partial mRNA blastn 932 357 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
24164804 24164804 PRJNA784298_P_NODE_14899_length_322_cov_11.746988_g14698_i0 PRJNA784298 14899 322 11.746988 37.82530136 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 584 2.41e-162   NTclustered gi|10782|emb|X54004.1| 5908 g14698 i0 99.379 88.4503105590062 322 2 100 0 1 322 1597 1918 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 28481 584 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
28957918 28957918 PRJNA784298_P_NODE_23748_length_251_cov_0.865169_g23547_i0 PRJNA784298 23748 251 0.865169 2.17157419 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 92.8 2.31e-20   NR KAL4436246.1 5901 g23547 i0 72.7 1.97211155378486 55 14 64.5 1 188 27 1 55 KAL4436246.1 hypothetical protein ABPG74_015837 [Tetrahymena malaccensis] diamond 495 92.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena malaccensis
30622222 30622222 PRJNA784298_P_NODE_27613_length_232_cov_2.421384_g27412_i0 PRJNA784298 27613 232 2.421384 5.61761088 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 114 2.37e-28   NR XP_001015806.1 312017 g27412 i0 73.3 0.969827586206897 75 20 97 0 7 231 1 75 XP_001015806.1 papain family cysteine protease [Tetrahymena thermophila SB210] diamond 225 114 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
31033382 31033382 PRJNA784298_P_NODE_25595_length_245_cov_0.895349_g25394_i0 PRJNA784298 25595 245 0.895349 2.19360505 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 122 8.06e-33   NR XP_001030006.1 312017 g25394 i0 92.2 0.783673469387755 64 5 78.4 0 194 3 62 125 XP_001030006.1 ornithine decarboxylase antizyme protein [Tetrahymena thermophila SB210] diamond 192 122 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;