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contig_metadata

33 rows where bioproject = "PRJNA784298" and tax_clade = "Sar"

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tax_phylum 5

analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 33 ✖

bioproject 1

  • PRJNA784298 · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2041277 2041277 PRJNA784298_P_NODE_23982_length_250_cov_1.129944_g23781_i0 PRJNA784298 23982 250 1.129944 2.82486 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 451 1.91e-122   NTclustered gi|2088238071|ref|NC_056910.1| 88167 g23781 i0 99.2 103.388 250 2 100 0 1 250 14891 14642 Poterioochromonas malhamensis strain SZCZR2049 plastid, complete genome blastn 25847 451 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
2041390 2041390 PRJNA784298_P_NODE_7922_length_447_cov_4.318182_g7721_i0 PRJNA784298 7922 447 4.318182 19.30227354 Tetrahymena sp. KGE15 1200497 SAR_Eukaryotes SAR_Eukaryotes 793 0   NTclustered gi|523704203|emb|HE861887.1| 1200497 g7721 i0 98.661 81.1834451901566 448 5 100 1 1 447 611 164 Tetrahymena sp. KGE15 partial 28S rRNA gene, strain KGE15 blastn 36289 793 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena sp. KGE15
4593776 4593776 PRJNA784298_P_NODE_9904_length_399_cov_2.671779_g9703_i0 PRJNA784298 9904 399 2.671779 10.66039821 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 678 0   NTclustered gi|542687346|ref|NC_022178.1| 1202772 g9703 i0 97.264 108.666666666667 402 7 100 2 1 399 6323 5923 Achlya hypogyna mitochondrion, complete genome blastn 43358 678 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
5868881 5868881 PRJNA784298_P_NODE_24345_length_249_cov_0.875000_g24144_i0 PRJNA784298 24345 249 0.875 2.17875 Synura petersenii 52555 SAR_Eukaryotes SAR_Eukaryotes 156 2.06e-45   NR ADB04540.1 52555 g24144 i0 85.4 0.987951807228916 82 12 98.8 0 3 248 97 178 ADB04540.1 cytochrome b, partial [Synura petersenii] diamond 246 156 1 Eukaryota Sar     Synurophyceae Synurales Mallomonadaceae Synura Synura petersenii
6317133 6317133 PRJNA784298_P_NODE_11425_length_370_cov_25.771044_g11224_i0 PRJNA784298 11425 370 25.771044 95.3528628 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 678 0   NTclustered gi|363498776|gb|JN662487.1| 120398 g11224 i0 99.73 99.9108108108108 370 1 100 0 1 370 720 351 Aphanomyces stellatus strain GF 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 36967 684 0.991228070175439 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
6317282 6317282 PRJNA784298_P_NODE_28165_length_223_cov_19.600000_g27964_i0 PRJNA784298 28165 223 19.6 43.708 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 93.5 1.17e-14   NTclustered gi|220983376|dbj|AB453012.1| 552662 g27964 i0 93.651 3.87443946188341 63 3 28 1 2 63 3610 3548 Cercozoa sp. YPF501 gene for nuclear large subunit ribosomal RNA, partial sequence blastn 864 93.5 1 Eukaryota Sar   Cercozoa         Cercozoa sp. YPF501
7143809 7143809 PRJNA784298_P_NODE_21226_length_267_cov_1.396907_g21025_i0 PRJNA784298 21226 267 1.396907 3.72974169 Polarella glacialis 89957 SAR_Eukaryotes SAR_Eukaryotes 134 1.42e-35   NR CAE8642508.1 89957 g21025 i0 81.6 5.12359550561798 76 14 85.4 0 228 1 1 76 CAE8642508.1 unnamed protein product [Polarella glacialis] diamond 1368 134 1 Eukaryota Sar     Dinophyceae Suessiales Suessiaceae Polarella Polarella glacialis
8418555 8418555 PRJNA784298_P_NODE_3647_length_668_cov_2.438655_g3451_i0 PRJNA784298 3647 668 2.438655 16.2902154 Tetrahymena pigmentosa 5907 SAR_Eukaryotes SAR_Eukaryotes 966 0   NTclustered gi|114329902|ref|NC_008339.1| 5907 g3451 i0 92.836 62.2065868263473 670 43 100 4 1 668 1965 1299 Tetrahymena pigmentosa mitochondrion, complete genome blastn 41554 966 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pigmentosa
10141865 10141865 PRJNA784298_P_NODE_25868_length_244_cov_0.900585_g25667_i0 PRJNA784298 25868 244 0.900585 2.1974274 Saprolegnia 4769 SAR_Eukaryotes SAR_Eukaryotes 335 1.9499999999999992e-87   NTclustered gi|1770647996|gb|MK941864.1| 101203 g25667 i0 91.393 85.0901639344262 244 21 100 0 1 244 33 276 Saprolegnia parasitica isolate S2 cytochrome c oxidase subunit II (Cox2) gene, partial cds; mitochondrial blastn 20762 335 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
10969432 10969432 PRJNA784298_P_NODE_17689_length_295_cov_1.090090_g17488_i0 PRJNA784298 17689 295 1.09009 3.2157655 Ochromonas danica 2986 SAR_Eukaryotes SAR_Eukaryotes 78.7 4.52e-10   NTclustered gi|11465862|ref|NC_002571.1| 2986 g17488 i0 86.301 0.247457627118644 73 8 24 2 91 162 32869 32798 Ochromonas danica mitochondrion, complete genome blastn 73 78.7 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Ochromonas Ochromonas danica
12244856 12244856 PRJNA784298_P_NODE_14390_length_328_cov_3.890196_g14189_i0 PRJNA784298 14390 328 3.890196 12.75984288 Wilsoniana portulacae 572137 SAR_Eukaryotes SAR_Eukaryotes 606 5.249999999999998e-169   NTclustered gi|210164195|gb|EU826120.1| 572137 g14189 i0 100 18.7560975609756 328 0 100 0 1 328 344 671 Wilsoniana portulacae strain HUH 640 large subunit ribosomal RNA gene, partial sequence blastn 6152 606 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Wilsoniana Wilsoniana portulacae
12244951 12244951 PRJNA784298_P_NODE_2310_length_837_cov_5.560209_g2130_i0 PRJNA784298 2310 837 5.560209 46.53894933 Tetrahymena pigmentosa 5907 SAR_Eukaryotes SAR_Eukaryotes 1338 0   NTclustered gi|114329902|ref|NC_008339.1| 5907 g2130 i0 95.59 27.5925925925926 839 29 100 7 1 837 2781 1949 Tetrahymena pigmentosa mitochondrion, complete genome blastn 23095 1338 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pigmentosa
12245002 12245002 PRJNA784298_P_NODE_28150_length_225_cov_5.085526_g27949_i0 PRJNA784298 28150 225 5.085526 11.4424335 Stramenopiles sp. MAST-1C-sp1 2805718 SAR_Eukaryotes SAR_Eukaryotes 76.8 1.19e-9   NTclustered gi|1960721522|gb|MW521824.1| 2805718 g27949 i0 83.133 0.368888888888889 83 14 37 0 138 220 5519 5601 Stramenopiles sp. MAST-1C-sp1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 83 76.8 1 Eukaryota Sar             Stramenopiles sp. MAST-1C-sp1
12245079 12245079 PRJNA784298_P_NODE_910_length_1362_cov_10.416602_g798_i0 PRJNA784298 910 1362 10.416602 141.87411924 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 2169 0   NTclustered gi|1111669722|ref|NC_032051.1| 112090 g798 i0 95.401 107.412628487518 1370 49 100 14 1 1362 3075 1712 Aphanomyces astaci isolate AP03 mitochondrion, complete genome blastn 146296 2169 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
13519192 13519192 PRJNA784298_P_NODE_26851_length_241_cov_0.916667_g26650_i0 PRJNA784298 26851 241 0.916667 2.20916747 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 147 3.46e-39   NR XP_001031773.1 312017 g26650 i0 93.7 0.983402489626556 79 5 98.3 0 239 3 203 281 XP_001031773.1 methylthioribose kinase [Tetrahymena thermophila SB210] diamond 237 147 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
13519255 13519255 PRJNA784298_P_NODE_6391_length_501_cov_2.593458_g6191_i0 PRJNA784298 6391 501 2.593458 12.99322458 Aphanomyces sp. 1982524 SAR_Eukaryotes SAR_Eukaryotes 926 0   NTclustered gi|1186441155|gb|KY989960.1| 1982524 g6191 i0 100 99.3872255489022 501 0 100 0 1 501 211 711 Aphanomyces sp. isolate CNUaq small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 49793 926 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces sp.
16516189 16516189 PRJNA784298_P_NODE_25953_length_243_cov_22.511765_g25752_i0 PRJNA784298 25953 243 22.511765 54.70358895 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 429 8.66e-116   NTclustered gi|166048041|emb|CU364162.1| 100861 g25752 i0 99.16 88.6954732510288 238 2 98 0 1 238 402 165 Aphanomyces euteiches cDNA blastn 21553 433 0.990762124711316 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
17343500 17343500 PRJNA784298_P_NODE_14334_length_329_cov_3.851562_g14133_i0 PRJNA784298 14334 329 3.851562 12.671638980000001 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 497 3.3099999999999994e-136   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g14133 i0 93.939 37.9088145896657 330 18 100 2 1 329 358 30 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 12472 497 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
17343647 17343647 PRJNA784298_P_NODE_27694_length_231_cov_2.202532_g27493_i0 PRJNA784298 27694 231 2.202532 5.08784892 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 422 1.37e-113   NTclustered gi|238617602|gb|FJ973377.1| 188950 g27493 i0 99.567 92.7792207792208 231 1 100 0 1 231 1867 2097 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 21432 422 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
18616943 18616943 PRJNA784298_P_NODE_24615_length_248_cov_0.880000_g24414_i0 PRJNA784298 24615 248 0.88 2.1824 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 459 1.13e-124   NTclustered gi|166046598|emb|CU367715.1| 100861 g24414 i0 100 99.7620967741936 248 0 100 0 1 248 126 373 Aphanomyces euteiches cDNA blastn 24741 459 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
19892064 19892064 PRJNA784298_P_NODE_11296_length_372_cov_5.735786_g11095_i0 PRJNA784298 11296 372 5.735786 21.33712392 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 688 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g11095 i0 100 1 372 0 100 0 1 372 401 772 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 372 688 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
19892065 19892065 PRJNA784298_P_NODE_1136_length_1222_cov_5.310705_g1010_i0 PRJNA784298 1136 1222 5.310705 64.8968151 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 1670 0   NTclustered gi|11466252|ref|NC_000862.1| 5908 g1010 i0 91.368 58.8011456628478 1228 95 99 10 2 1222 32604 33827 Tetrahymena pyriformis mitochondrion, complete genome blastn 71855 1670 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
19892105 19892105 PRJNA784298_P_NODE_15436_length_317_cov_1.110656_g15235_i0 PRJNA784298 15436 317 1.110656 3.52077952 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 337 7.319999999999998e-88   NTclustered gi|118379397|ref|XM_001022864.1| 312017 g15235 i0 85.893 1.00630914826498 319 41 100 4 1 317 168 484 Tetrahymena thermophila SB210 60S ribosomal protein L13 partial mRNA blastn 319 337 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
19892216 19892216 PRJNA784298_P_NODE_25496_length_245_cov_0.895349_g25295_i0 PRJNA784298 25496 245 0.895349 2.19360505 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 370 5.38e-98   NTclustered gi|673039884|ref|XM_008875681.1| 157072 g25295 i0 93.878 47.269387755102 245 15 100 0 1 245 266 510 Aphanomyces invadans 60S ribosomal protein mRNA blastn 11581 370 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
23718166 23718166 PRJNA784298_P_NODE_20839_length_269_cov_17.653061_g20638_i0 PRJNA784298 20839 269 17.653061 47.48673409 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 357 4.66e-94   NTclustered gi|829158923|ref|XM_012796529.1| 312017 g20638 i0 96.729 3.46468401486989 214 7 80 0 9 222 50 263 Tetrahymena thermophila SB210 hypothetical protein partial mRNA blastn 932 357 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
23718235 23718235 PRJNA784298_P_NODE_26799_length_241_cov_0.916667_g26598_i0 PRJNA784298 26799 241 0.916667 2.20916747 Plasmodium berghei 5821 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|1843575955|ref|XM_034567978.1| 5823 g26598 i0 100 0.240663900414938 30 0 12 0 196 225 1855 1884 Plasmodium berghei ANKA clathrin adaptor domain-containing protein, putative (PBANKA_1459400), partial mRNA blastn 58 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
24164804 24164804 PRJNA784298_P_NODE_14899_length_322_cov_11.746988_g14698_i0 PRJNA784298 14899 322 11.746988 37.82530136 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 584 2.41e-162   NTclustered gi|10782|emb|X54004.1| 5908 g14698 i0 99.379 88.4503105590062 322 2 100 0 1 322 1597 1918 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 28481 584 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
24991761 24991761 PRJNA784298_P_NODE_19140_length_283_cov_0.990476_g18939_i0 PRJNA784298 19140 283 0.990476 2.80304708 Rhizaria sp. 2204297 SAR_Eukaryotes SAR_Eukaryotes 125 3.21e-32   NR QFP99032.1 2204297 g18939 i0 66 0.996466431095406 94 32 99.6 0 282 1 138 231 QFP99032.1 NADH dehydrogenase subunit 1 [Rhizaria sp.] diamond 282 125 1 Eukaryota Sar             Rhizaria sp.
28474878 28474878 PRJNA784298_P_NODE_25626_length_245_cov_0.895349_g25425_i0 PRJNA784298 25626 245 0.895349 2.19360505 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 80.1 2.69e-15   NR KAJ1435103.1 483371 g25425 i0 45.6 0.96734693877551 79 43 96.7 0 7 243 486 564 KAJ1435103.1 hypothetical protein B484DRAFT_417255, partial [Ochromonadaceae sp. CCMP2298] diamond 237 80.1 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
28957918 28957918 PRJNA784298_P_NODE_23748_length_251_cov_0.865169_g23547_i0 PRJNA784298 23748 251 0.865169 2.17157419 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 92.8 2.31e-20   NR KAL4436246.1 5901 g23547 i0 72.7 1.97211155378486 55 14 64.5 1 188 27 1 55 KAL4436246.1 hypothetical protein ABPG74_015837 [Tetrahymena malaccensis] diamond 495 92.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena malaccensis
30622222 30622222 PRJNA784298_P_NODE_27613_length_232_cov_2.421384_g27412_i0 PRJNA784298 27613 232 2.421384 5.61761088 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 114 2.37e-28   NR XP_001015806.1 312017 g27412 i0 73.3 0.969827586206897 75 20 97 0 7 231 1 75 XP_001015806.1 papain family cysteine protease [Tetrahymena thermophila SB210] diamond 225 114 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
31033382 31033382 PRJNA784298_P_NODE_25595_length_245_cov_0.895349_g25394_i0 PRJNA784298 25595 245 0.895349 2.19360505 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 122 8.06e-33   NR XP_001030006.1 312017 g25394 i0 92.2 0.783673469387755 64 5 78.4 0 194 3 62 125 XP_001030006.1 ornithine decarboxylase antizyme protein [Tetrahymena thermophila SB210] diamond 192 122 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
31760353 31760353 PRJNA784298_P_NODE_20177_length_275_cov_1.074257_g19976_i0 PRJNA784298 20177 275 1.074257 2.95420675 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 147 2.37e-43   NR CEO97530.1 37360 g19976 i0 80.9 0.970909090909091 89 17 97.1 0 269 3 33 121 CEO97530.1 hypothetical protein PBRA_000875 [Plasmodiophora brassicae] diamond 267 147 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;