RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA784298", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA784298 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2041283 2041283 PRJNA784298_P_NODE_24642_length_248_cov_0.880000_g24441_i0 PRJNA784298 24642 248 0.88 2.1824 Lobosporangium transversale 64571 Fungi Fungi 196 9.79e-46   NTclustered gi|1227143098|ref|XM_022027954.1| 64571 g24441 i0 82.589 28.5725806451613 224 37 90 2 1 223 363 141 Lobosporangium transversale zinc-binding ribosomal protein (BCR41DRAFT_388020), partial mRNA blastn 7086 196 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
10969416 10969416 PRJNA784298_P_NODE_15829_length_312_cov_2.330544_g15628_i0 PRJNA784298 15829 312 2.330544 7.27129728 Rhizopus microsporus 58291 Fungi Fungi 159 1.67e-34   NTclustered gi|1331207227|ref|XM_023607402.1| 1340429 g15628 i0 84.906 25.7179487179487 159 22 51 2 151 308 557 400 Rhizopus microsporus ATCC 52813 ribosomal protein L19/L19e (RHIMIDRAFT_220265), mRNA blastn 8024 159 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus
28222042 28222042 PRJNA784298_P_NODE_23706_length_251_cov_0.865169_g23505_i0 PRJNA784298 23706 251 0.865169 2.17157419 Linnemannia hyalina 64524 Fungi Fungi 49.7 1.37e-4   NR KAG9066819.1 64524 g23505 i0 52.3 3 44 21 52.6 0 133 2 2 45 KAG9066819.1 hypothetical protein KI688_012731 [Linnemannia hyalina] diamond 753 49.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Linnemannia Linnemannia hyalina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;