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contig_metadata

8 rows where bioproject = "PRJNA784298", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 8 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 8 ✖

bioproject 1

  • PRJNA784298 · 8 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
765436 765436 PRJNA784298_P_NODE_28301_length_216_cov_16.776224_g28100_i0 PRJNA784298 28301 216 16.776224 36.23664384 Bradybaena similaris 145626 Mollusca Mollusca 381 2.139999999999999e-101   NTclustered gi|2913001816|dbj|AP039609.1| 145626 g28100 i0 98.605 159.513888888889 215 3 99 0 2 216 1245 1459 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 28, sequence blastn 34455 381 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
3316658 3316658 PRJNA784298_P_NODE_25763_length_244_cov_1.432749_g25562_i0 PRJNA784298 25763 244 1.432749 3.49590756 Ponentina sp. USCM4922 2482531 Mollusca Mollusca 420 5.24e-113   NTclustered gi|1495410310|gb|MF983424.1| 2482531 g25562 i0 100 91.5901639344262 227 0 93 0 1 227 429 655 Ponentina sp. USCM4922 cytochrome oxidase subunit 1 (cox1) gene, partial cds; mitochondrial blastn 22348 420 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Geomitridae Ponentina Ponentina sp. USCM4922
4593751 4593751 PRJNA784298_P_NODE_8324_length_436_cov_3.187328_g8123_i0 PRJNA784298 8324 436 3.187328 13.89675008 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.042   NTclustered gi|2912999747|dbj|AP039606.1| 145626 g8123 i0 100 0.0642201834862385 28 0 6 0 364 391 2800684 2800657 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 25, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
5868913 5868913 PRJNA784298_P_NODE_27305_length_236_cov_2.251534_g27104_i0 PRJNA784298 27305 236 2.251534 5.31362024 Ruditapes philippinarum 129788 Mollusca Mollusca 58.4 4.55e-4   NTclustered gi|2616504715|ref|XM_060705649.1| 129788 g27104 i0 100 0.13135593220339 31 0 13 0 200 230 421 451 PREDICTED: Ruditapes philippinarum beta-1,4-mannosyltransferase egh-like (LOC132721363), mRNA blastn 31 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum
7143833 7143833 PRJNA784298_P_NODE_23966_length_250_cov_1.305085_g23765_i0 PRJNA784298 23966 250 1.305085 3.2627125 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.023   NTclustered gi|2912996298|dbj|AP039601.1| 145626 g23765 i0 100 0.112 28 0 11 0 37 64 44019045 44019018 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 20, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
13519025 13519025 PRJNA784298_P_NODE_12171_length_358_cov_3.203509_g11970_i0 PRJNA784298 12171 358 3.203509 11.46856222 Bradybaena similaris 145626 Mollusca Mollusca 63.9 1.57e-5   NTclustered gi|2912990805|dbj|AP039595.1| 145626 g11970 i0 77.778 0.776536312849162 108 21 30 2 127 233 8051560 8051665 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 14, sequence blastn 278 63.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
16067790 16067790 PRJNA784298_P_NODE_17813_length_293_cov_3.363636_g17612_i0 PRJNA784298 17813 293 3.363636 9.85545348 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.008   NTclustered gi|2913000417|dbj|AP039607.1| 145626 g17612 i0 96.875 0.218430034129693 32 1 11 0 225 256 8068705 8068736 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 26, sequence blastn 64 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
17343478 17343478 PRJNA784298_P_NODE_12534_length_353_cov_1.339286_g12333_i0 PRJNA784298 12534 353 1.339286 4.72767958 Haliotis rubra 36100 Mollusca Mollusca 52.8 0.033   NTclustered gi|2194132957|ref|XM_046722514.1| 36100 g12333 i0 100 0.0793201133144476 28 0 8 0 210 237 3324 3297 PREDICTED: Haliotis rubra serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform-like (LOC124286164), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rubra

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;