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contig_metadata

19 rows where bioproject = "PRJNA784298" and tax_clade = "Discoba"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 19 ✖

bioproject 1

  • PRJNA784298 · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
765420 765420 PRJNA784298_P_NODE_26561_length_242_cov_0.911243_g26360_i0 PRJNA784298 26561 242 0.911243 2.20520806 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 364 2.4699999999999992e-96   NTclustered gi|290996397|ref|XM_002680723.1| 5762 g26360 i0 93.802 4.92561983471074 242 15 100 0 1 242 738 979 Naegleria gruberi histone deacetylase (NAEGRDRAFT_35589), partial mRNA blastn 1192 364 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
1213177 1213177 PRJNA784298_P_NODE_21561_length_264_cov_4.151832_g21360_i0 PRJNA784298 21561 264 4.151832 10.96083648 Leishmania 5658 Euglenozoa other_Eukaryota 339 1.65e-88   NTclustered gi|2593250474|emb|OY748421.1| 5660 g21360 i0 89.744 132.435606060606 273 16 100 9 1 264 990123 989854 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 blastn 34963 339 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
3316677 3316677 PRJNA784298_P_NODE_27903_length_228_cov_3.600000_g27702_i0 PRJNA784298 27903 228 3.6 8.208 Naegleria jamiesoni 36335 Heterolobosea other_Eukaryota 385 1.76e-102   NTclustered gi|2351573|gb|U80061.1|NJU80061 36335 g27702 i0 98.182 94.8157894736842 220 4 96 0 9 228 833 1052 Naegleria jamiesoni 18S ribosomal RNA gene, partial sequence blastn 21618 385 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria jamiesoni
3765008 3765008 PRJNA784298_P_NODE_5123_length_559_cov_22.812757_g4924_i0 PRJNA784298 5123 559 22.812757 127.52331163 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 845 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g4924 i0 93.95 32.5509838998211 562 28 99 5 2 558 2353 2913 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 18196 848 0.996462264150943 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
8866393 8866393 PRJNA784298_P_NODE_25927_length_244_cov_0.900585_g25726_i0 PRJNA784298 25927 244 0.900585 2.1974274 Trypanosoma 5690 Euglenozoa other_Eukaryota 392 1.14e-104   NTclustered gi|71745557|ref|XM_822316.1| 185431 g25726 i0 100 4.58196721311475 212 0 87 0 33 244 1 212 Trypanosoma brucei brucei TREU927 60S ribosomal protein L27a (Tb09.v1.0640), partial mRNA blastn 1118 392 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
9693575 9693575 PRJNA784298_P_NODE_11268_length_373_cov_1.860000_g11067_i0 PRJNA784298 11268 373 1.86 6.9378 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 523 6.259999999999998e-144   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g11067 i0 91.979 3.97319034852547 374 28 100 2 1 373 2203 2575 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1482 523 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
14793862 14793862 PRJNA784298_P_NODE_12552_length_352_cov_8.150538_g12351_i0 PRJNA784298 12552 352 8.150538 28.68989376 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 606 5.659999999999998e-169   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g12351 i0 97.727 11.40625 352 8 100 0 1 352 3609 3960 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 4015 606 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
16516118 16516118 PRJNA784298_P_NODE_15353_length_317_cov_3.991803_g15152_i0 PRJNA784298 15353 317 3.991803 12.65401551 Naegleria 5761 Heterolobosea other_Eukaryota 555 1.8599999999999998e-153   NTclustered gi|2618963742|gb|OR769034.1| 5762 g15152 i0 98.119 95.3943217665615 319 4 100 1 1 317 57 375 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 30240 555 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19064962 19064962 PRJNA784298_P_NODE_27095_length_238_cov_5.727273_g26894_i0 PRJNA784298 27095 238 5.727273 13.63090974 Naegleria 5761 Heterolobosea other_Eukaryota 429 8.45e-116   NTclustered gi|2618963742|gb|OR769034.1| 5762 g26894 i0 99.16 10.1764705882353 238 2 100 0 1 238 5555 5792 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2422 429 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19892192 19892192 PRJNA784298_P_NODE_23696_length_251_cov_0.865169_g23495_i0 PRJNA784298 23696 251 0.865169 2.17157419 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 278 3.4500000000000005e-70   NTclustered gi|290982264|ref|XM_002673805.1| 5762 g23495 i0 86.667 1.01593625498008 255 29 100 4 1 251 542 289 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_80842), mRNA blastn 255 278 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
21167823 21167823 PRJNA784298_P_NODE_15697_length_313_cov_130.500000_g15496_i0 PRJNA784298 15697 313 130.5 408.465 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 320 7.27e-83   NTclustered gi|1031970223|gb|CP015657.1| 85057 g15496 i0 85.304 110.121405750799 313 42 99 4 1 312 467881 467572 Trypanosoma cruzi cruzi strain Sylvio X10/cl1 chromosome TcI7, partial sequence blastn 34468 320 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
22442667 22442667 PRJNA784298_P_NODE_23058_length_255_cov_0.945055_g22857_i0 PRJNA784298 23058 255 0.945055 2.40989025 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 416 7.129999999999998e-112   NTclustered gi|62910979|gb|AY925016.1| 5762 g22857 i0 96.078 6.01176470588235 255 10 100 0 1 255 143 397 Naegleria gruberi Rpl7A gene, partial cds blastn 1533 416 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23718061 23718061 PRJNA784298_P_NODE_11039_length_377_cov_1.460526_g10838_i0 PRJNA784298 11039 377 1.460526 5.50618302 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 597 3.679999999999999e-166   NTclustered gi|291000815|ref|XM_002682929.1| 5762 g10838 i0 95.225 51.5835543766578 377 18 100 0 1 377 1370 994 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_56672), mRNA blastn 19447 597 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
26610237 26610237 PRJNA784298_P_NODE_24901_length_247_cov_0.885057_g24700_i0 PRJNA784298 24901 247 0.885057 2.18609079 Phytomonas sp. Hart1 223615 Euglenozoa other_Eukaryota 80.1 2.85e-15   NR CCW71629.1 223615 g24700 i0 56.5 0.753036437246964 62 27 75.3 0 246 61 1744 1805 CCW71629.1 unnamed protein product [Phytomonas sp. Hart1] diamond 186 80.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Phytomonas Phytomonas sp. Hart1
26990131 26990131 PRJNA784298_P_NODE_23702_length_251_cov_0.865169_g23501_i0 PRJNA784298 23702 251 0.865169 2.17157419 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 136 3.54e-35   NR XP_044566366.1 5763 g23501 i0 75.9 2.91633466135458 83 19 99.2 1 251 3 398 479 XP_044566366.1 uncharacterized protein FDP41_012310 [Naegleria fowleri] diamond 732 136 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
29990511 29990511 PRJNA784298_P_NODE_26171_length_243_cov_0.905882_g25970_i0 PRJNA784298 26171 243 0.905882 2.20129326 Acrasis kona 1008807 Heterolobosea other_Eukaryota 130 3.71e-33   NR KAL0480423.1 1008807 g25970 i0 84.1 0.851851851851852 69 11 85.2 0 240 34 701 769 KAL0480423.1 hypothetical protein AKO1_011085 [Acrasis kona] diamond 207 130 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30370048 30370048 PRJNA784298_P_NODE_25632_length_245_cov_0.895349_g25431_i0 PRJNA784298 25632 245 0.895349 2.19360505 Acrasis kona 1008807 Heterolobosea other_Eukaryota 134 1.7099999999999996e-34   NR KAL0482138.1 1008807 g25431 i0 76.5 0.991836734693878 81 18 99.2 1 245 3 489 568 KAL0482138.1 NADPH-cytochrome P450 reductase [Acrasis kona] diamond 243 134 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30496091 30496091 PRJNA784298_P_NODE_12593_length_352_cov_1.799283_g12392_i0 PRJNA784298 12593 352 1.799283 6.33347616 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 133 3.47e-35   NR 5COT_A 5762 g12392 i0 54.7 0.997159090909091 117 42 99.7 2 352 2 99 204 5COT_A Chain A, Naegleria gruberi RNA ligase [Naegleria gruberi] diamond 351 133 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31033367 31033367 PRJNA784298_P_NODE_13395_length_341_cov_1.809701_g13194_i0 PRJNA784298 13395 341 1.809701 6.17108041 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 145 7.34e-40   NR 5COT_A 5762 g13194 i0 60.7 0.98533724340176 112 44 98.5 0 6 341 191 302 5COT_A Chain A, Naegleria gruberi RNA ligase [Naegleria gruberi] diamond 336 145 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;