RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA784298", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Terryibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Terryibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA784298 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27906240 27906240 PRJNA784298_P_NODE_5105_length_561_cov_2.497951_g4906_i0 PRJNA784298 5105 561 2.497951 14.01350511 Candidatus Terrybacteria bacterium RIFCSPHIGHO2_ 2750081 Bacteria Bacteria 59.7 6.88e-8   NR OHA47266.1 1802361 g4906 i0 36.4 1.11229946524064 88 55 47.1 1 275 538 31 117 OHA47266.1 MAG: hypothetical protein A2828_00140 [Candidatus Terrybacteria bacterium RIFCSPHIGHO2_01_FULL_43_35] diamond 624 59.7 1 Bacteria Bacteria candidate phyla   Candidatus Terryibacteriota         Candidatus Terrybacteria bacterium RIFCSPHIGHO2_01_FULL_43_35

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;