RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA782551" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA782551 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17342059 17342059 PRJNA782551_P_NODE_9474_length_305_cov_1.991379_g9352_i0 PRJNA782551 9474 305 1.991379 6.07370595 Liolophura japonica 13599 Mollusca Mollusca 195 4.46e-45   NTclustered gi|2724251389|ref|XM_064751378.1| 13599 g9352 i0 79.286 65.3639344262295 280 56 91 2 27 305 1155 1433 PREDICTED: Liolophura japonica tubulin beta-2B chain-like (LOC135471935), transcript variant X1, mRNA blastn 19936 195 1 Eukaryota Opisthokonta Metazoa Mollusca Polyplacophora Chitonida Chitonidae Liolophura Liolophura japonica
26864085 26864085 PRJNA782551_P_NODE_5941_length_382_cov_1.495146_g5819_i0 PRJNA782551 5941 382 1.495146 5.71145772 Magallana gigas 29159 Mollusca Mollusca 53.1 2.94e-5   NR XP_034313778.2 29159 g5819 i0 37.1 0.549738219895288 70 44 55 0 242 33 62 131 XP_034313778.2 R3H domain-containing protein 4 [Magallana gigas] diamond 210 53.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas
27622434 27622434 PRJNA782551_P_NODE_23544_length_242_cov_0.911243_g23422_i0 PRJNA782551 23544 242 0.911243 2.20520806 Crassostrea virginica 6565 Mollusca Mollusca 73.2 7.02e-13   NR XP_022293402.1 6565 g23422 i0 62.5 5.72727272727273 56 21 69.4 0 202 35 775 830 XP_022293402.1 LOW QUALITY PROTEIN: src substrate cortactin-like [Crassostrea virginica] diamond 1386 73.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
28105071 28105071 PRJNA782551_P_NODE_6365_length_369_cov_1.557432_g6243_i0 PRJNA782551 6365 369 1.557432 5.74692408 Metazoa 33208 Mollusca Mollusca 184 2.5e-53   NR XP_046360100.2 6454 g6243 i0 74.6 5.94308943089431 122 31 99.2 0 3 368 351 472 XP_046360100.2 4-hydroxybutyrate coenzyme A transferase-like [Haliotis rufescens] diamond 2193 184 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
28190391 28190391 PRJNA782551_P_NODE_22746_length_243_cov_0.905882_g22624_i0 PRJNA782551 22746 243 0.905882 2.20129326 Pecten maximus 6579 Mollusca Mollusca 69.7 8.73e-13   NR XP_033733120.1 6579 g22624 i0 55 2.95061728395062 60 27 74.1 0 241 62 92 151 XP_033733120.1 ATP synthase lipid-binding protein, mitochondrial-like isoform X2 [Pecten maximus] diamond 717 69.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Pecten Pecten maximus
29548107 29548107 PRJNA782551_P_NODE_10090_length_296_cov_1.381166_g9968_i0 PRJNA782551 10090 296 1.381166 4.08825136 Haliotis rufescens 6454 Mollusca Mollusca 63.9 2.52e-9   NR XP_048251116.1 6454 g9968 i0 36.5 0.861486486486487 85 53 85.1 1 275 24 834 918 XP_048251116.1 glutamyl aminopeptidase-like isoform X3 [Haliotis rufescens] diamond 255 63.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
31317520 31317520 PRJNA782551_P_NODE_21095_length_245_cov_0.895349_g20973_i0 PRJNA782551 21095 245 0.895349 2.19360505 Potamilus streckersoni 2493646 Mollusca Mollusca 58.2 7.56e-8   NR KAK3605256.1 2493646 g20973 i0 46.9 0.991836734693878 81 41 96.7 2 245 9 78 158 KAK3605256.1 hypothetical protein CHS0354_037657 [Potamilus streckersoni] diamond 243 58.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Unionida Unionidae Potamilus Potamilus streckersoni
31453520 31453520 PRJNA782551_P_NODE_10536_length_290_cov_1.691244_g10414_i0 PRJNA782551 10536 290 1.691244 4.9046076 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 47 0.00215   NR XP_070204869.1 31220 g10414 i0 39.5 2.2551724137931 76 43 75.5 2 227 9 88 163 XP_070204869.1 uncharacterized protein [Littorina saxatilis] diamond 654 47 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;