RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA782551" and tax_phylum = "Acanthocephala"

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tax_superkingdom 1

tax_phylum 1

  • Acanthocephala · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA782551 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27116595 27116595 PRJNA782551_P_NODE_12422_length_275_cov_1.905941_g12300_i0 PRJNA782551 12422 275 1.905941 5.24133775 Pomphorhynchus laevis 141832 Acanthocephala other_Eukaryota 81.3 3.67e-16   NR KAI0981482.1 141832 g12300 i0 57.5 8.36727272727273 87 36 94.9 1 269 9 73 158 KAI0981482.1 hypothetical protein GJ496_000944 [Pomphorhynchus laevis] diamond 2301 82 0.991463414634146 Eukaryota Opisthokonta Metazoa Acanthocephala Palaeacanthocephala Echinorhynchida Pomphorhynchidae Pomphorhynchus Pomphorhynchus laevis
32298588 32298588 PRJNA782551_P_NODE_18019_length_249_cov_0.875000_g17897_i0 PRJNA782551 18019 249 0.875 2.17875 Pomphorhynchus laevis 141832 Acanthocephala other_Eukaryota 79.3 5.24e-15   NR KAI0986341.1 141832 g17897 i0 42.3 1.85542168674699 78 45 94 0 2 235 22 99 KAI0986341.1 hypothetical protein GJ496_005822 [Pomphorhynchus laevis] diamond 462 79.3 1 Eukaryota Opisthokonta Metazoa Acanthocephala Palaeacanthocephala Echinorhynchida Pomphorhynchidae Pomphorhynchus Pomphorhynchus laevis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;