RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA782551", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA782551 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27274903 27274903 PRJNA782551_P_NODE_12963_length_271_cov_1.555556_g12841_i0 PRJNA782551 12963 271 1.555556 4.21555676 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 60.1 3.98e-8   NR CAF0977989.1 2762511 g12841 i0 37.2 4.2619926199262 78 49 86.3 0 269 36 473 550 CAF0977989.1 unnamed protein product [Rotaria sp. Silwood1] diamond 1155 60.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1
27315979 27315979 PRJNA782551_P_NODE_8503_length_321_cov_2.326613_g8381_i0 PRJNA782551 8503 321 2.326613 7.46842773 Metazoa 33208 Rotifera other_Eukaryota 84.3 9.72e-17   NR CAF1095581.1 104777 g8381 i0 39.6 4.14018691588785 111 58 99.1 3 3 320 206 312 CAF1095581.1 unnamed protein product [Brachionus calyciflorus] diamond 1329 84.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;