RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA782551", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA782551 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29990472 29990472 PRJNA782551_P_NODE_13331_length_268_cov_1.574359_g13209_i0 PRJNA782551 13331 268 1.574359 4.21928212 Anneissia japonica 1529436 Echinodermata other_Eukaryota 82.8 1.8e-17   NR XP_033103166.1 1529436 g13209 i0 52.9 2.31716417910448 70 32 77.2 1 1 207 111 180 XP_033103166.1 ADP-ribosylation factor 2-like [Anneissia japonica] diamond 621 82.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
32212701 32212701 PRJNA782551_P_NODE_4758_length_429_cov_1.081461_g4636_i0 PRJNA782551 4758 429 1.081461 4.63946769 Metazoa 33208 Echinodermata other_Eukaryota 232 6.19e-71   NR XP_063954487.1 7653 g4636 i0 75.5 11.8461538461538 139 34 97.2 0 419 3 375 513 XP_063954487.1 asparagine--tRNA ligase, cytoplasmic-like [Lytechinus pictus] diamond 5082 232 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;