contig_metadata
11 rows where bioproject = "PRJNA782551", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1212584 | 1212584 | PRJNA782551_P_NODE_8041_length_330_cov_1.591440_g7919_i0 | PRJNA782551 | 8041 | 330 | 1.59144 | 5.251752 | root | 1 | Root_unresolved | Root_unresolved | 599 | 8.849999999999995e-167 | NTclustered | gi|1851159111|gb|CP054256.1| | 2102 | g7919 | i0 | 99.394 | 167.006060606061 | 330 | 2 | 100 | 0 | 1 | 330 | 646830 | 646501 | Mycoplasma mycoides strain T1/44 GP chromosome, complete genome | blastn | 55112 | 604 | 0.991721854304636 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma mycoides | ||
| 2487912 | 2487912 | PRJNA782551_P_NODE_15762_length_251_cov_0.865169_g15640_i0 | PRJNA782551 | 15762 | 251 | 0.865169 | 2.17157419 | Mesomycoplasma | 2923352 | Bacteria | Bacteria | 464 | 2.47e-126 | NTclustered | gi|2713084492|gb|CP150431.1| | 2100 | g15640 | i0 | 100 | 28.5179282868526 | 251 | 0 | 100 | 0 | 1 | 251 | 556854 | 557104 | Mesomycoplasma hyorhinis strain Nahrain chromosome | blastn | 7158 | 464 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 6316603 | 6316603 | PRJNA782551_P_NODE_7585_length_339_cov_1.718045_g7463_i0 | PRJNA782551 | 7585 | 339 | 1.718045 | 5.82417255 | Mycoplasma | 2093 | Bacteria | Bacteria | 619 | 6.999999999999999e-173 | NTclustered | gi|2294785939|gb|CP103424.1| | 51364 | g7463 | i0 | 99.704 | 195.421828908555 | 338 | 1 | 99 | 0 | 1 | 338 | 269646 | 269983 | Mycoplasma cottewii strain VIS chromosome, complete genome | blastn | 66248 | 625 | 0.9904 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma cottewii | ||
| 8416839 | 8416839 | PRJNA782551_P_NODE_4447_length_445_cov_1.862903_g4325_i0 | PRJNA782551 | 4447 | 445 | 1.862903 | 8.28991835 | Malacoplasma muris | 2119 | Bacteria | Bacteria | 647 | 0 | NTclustered | gi|299851933|gb|HM135461.1| | 2119 | g4325 | i0 | 93.018 | 119.076404494382 | 444 | 30 | 99 | 1 | 1 | 444 | 390 | 832 | Mycoplasma muris strain ATCC 33757 23S ribosomal RNA gene, partial sequence | blastn | 52989 | 647 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Malacoplasma | Malacoplasma muris | |||
| 17790201 | 17790201 | PRJNA782551_P_NODE_18694_length_248_cov_0.880000_g18572_i0 | PRJNA782551 | 18694 | 248 | 0.88 | 2.1824 | Mesomycoplasma | 2923352 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|1720621726|gb|CP035041.1| | 2100 | g18572 | i0 | 100 | 15 | 248 | 0 | 100 | 0 | 1 | 248 | 644020 | 644267 | Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome | blastn | 3720 | 459 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 19064194 | 19064194 | PRJNA782551_P_NODE_22935_length_243_cov_0.905882_g22813_i0 | PRJNA782551 | 22935 | 243 | 0.905882 | 2.20129326 | Mesomycoplasma | 2923352 | Bacteria | Bacteria | 448 | 2.39e-121 | NTclustered | gi|2713084492|gb|CP150431.1| | 2100 | g22813 | i0 | 100 | 14.9382716049383 | 242 | 0 | 99 | 0 | 1 | 242 | 586564 | 586805 | Mesomycoplasma hyorhinis strain Nahrain chromosome | blastn | 3630 | 448 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 22890266 | 22890266 | PRJNA782551_P_NODE_6938_length_354_cov_1.622776_g6816_i0 | PRJNA782551 | 6938 | 354 | 1.622776 | 5.74462704 | Malacoplasma | 2791001 | Bacteria | Bacteria | 377 | 4.86e-100 | NTclustered | gi|470476279|ref|NR_076329.1| | 28227 | g6816 | i0 | 86.197 | 126.977401129944 | 355 | 41 | 99 | 8 | 1 | 351 | 66 | 416 | Mycoplasma penetrans strain HF-2 23S ribosomal RNA gene, complete sequence | blastn | 44950 | 377 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Malacoplasma | Malacoplasma penetrans | |||
| 24164066 | 24164066 | PRJNA782551_P_NODE_10459_length_291_cov_1.412844_g10337_i0 | PRJNA782551 | 10459 | 291 | 1.412844 | 4.11137604 | Malacoplasma | 2791001 | Bacteria | Bacteria | 292 | 1.46e-74 | NTclustered | gi|299851933|gb|HM135461.1| | 2119 | g10337 | i0 | 85.135 | 144.323024054983 | 296 | 33 | 100 | 10 | 1 | 291 | 1463 | 1174 | Mycoplasma muris strain ATCC 33757 23S ribosomal RNA gene, partial sequence | blastn | 41998 | 292 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Malacoplasma | Malacoplasma muris | |||
| 24164127 | 24164127 | PRJNA782551_P_NODE_17059_length_250_cov_0.870056_g16937_i0 | PRJNA782551 | 17059 | 250 | 0.870056 | 2.17514 | Mesomycoplasma | 2923352 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|1450419971|emb|LS991950.1| | 2100 | g16937 | i0 | 100 | 16 | 250 | 0 | 100 | 0 | 1 | 250 | 486808 | 487057 | Mycoplasma hyorhinis strain NCTC10130 genome assembly, chromosome: 1 | blastn | 4000 | 462 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 27315975 | 27315975 | PRJNA782551_P_NODE_17063_length_250_cov_0.870056_g16941_i0 | PRJNA782551 | 17063 | 250 | 0.870056 | 2.17514 | Mycoplasma | 2093 | Bacteria | Bacteria | 52 | 2.22e-5 | NR | MBR3571609.1 | 2685873 | g16941 | i0 | 65.1 | 2.352 | 43 | 15 | 51.6 | 0 | 121 | 249 | 3 | 45 | MBR3571609.1 APC family permease [Mycoplasmataceae bacterium] | diamond | 588 | 52 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasmataceae bacterium | |||
| 27938128 | 27938128 | PRJNA782551_P_NODE_14405_length_260_cov_1.604278_g14283_i0 | PRJNA782551 | 14405 | 260 | 1.604278 | 4.1711228 | Malacoplasma iowae | 2116 | Bacteria | Bacteria | 50.1 | 1.22e-4 | NR | WP_406646911.1 | 2116 | g14283 | i0 | 28.6 | 0.969230769230769 | 84 | 60 | 96.9 | 0 | 9 | 260 | 655 | 738 | WP_406646911.1 AAA family ATPase [Malacoplasma iowae] | diamond | 252 | 50.1 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Malacoplasma | Malacoplasma iowae |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;