RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA782551", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA782551 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
763655 763655 PRJNA782551_P_NODE_18561_length_248_cov_0.880000_g18439_i0 PRJNA782551 18561 248 0.88 2.1824 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 327 3.33e-85   NTclustered gi|1624698156|ref|XM_029013946.1| 189622 g18439 i0 91.322 21.3104838709677 242 17 99 4 2 243 18 255 Babesia ovata CTP synthase, putative (BOVATA_050290), partial mRNA blastn 5285 327 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
3314931 3314931 PRJNA782551_P_NODE_17363_length_249_cov_1.647727_g17241_i0 PRJNA782551 17363 249 1.647727 4.10284023 Plasmodium falciparum 5833 SAR_Eukaryotes SAR_Eukaryotes 139 1.68e-28   NTclustered gi|258597461|ref|XM_001350446.2| 36329 g17241 i0 100 0.887550200803213 75 0 30 0 101 175 203 129 Plasmodium falciparum 3D7 LIMP protein, putative (PF3D7_1207300), partial mRNA blastn 221 139 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
7142280 7142280 PRJNA782551_P_NODE_3106_length_543_cov_5.019149_g2985_i0 PRJNA782551 3106 543 5.019149 27.25397907 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 959 0   NTclustered gi|1624698158|ref|XM_029013947.1| 189622 g2985 i0 98.527 1749.39226519337 543 8 100 0 1 543 1365 1907 Babesia ovata endonuclease-reverse transcriptase (BOVATA_050300), partial mRNA blastn 949920 959 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
10967913 10967913 PRJNA782551_P_NODE_4969_length_418_cov_2.281159_g4847_i0 PRJNA782551 4969 418 2.281159 9.53524462 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 460 5.639999999999998e-125   NTclustered gi|1624698156|ref|XM_029013946.1| 189622 g4847 i0 86.874 1.00239234449761 419 46 100 8 1 418 485 75 Babesia ovata CTP synthase, putative (BOVATA_050290), partial mRNA blastn 419 460 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
12243226 12243226 PRJNA782551_P_NODE_16170_length_251_cov_0.865169_g16048_i0 PRJNA782551 16170 251 0.865169 2.17157419 Theileria annulata 5874 SAR_Eukaryotes SAR_Eukaryotes 420 5.41e-113   NTclustered gi|84996802|ref|XM_948030.1| 5874 g16048 i0 96.813 1.99203187250996 251 8 100 0 1 251 1866 1616 Theileria annulata uncharacterized protein (TA08560), partial mRNA blastn 500 420 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata
17342018 17342018 PRJNA782551_P_NODE_5194_length_409_cov_1.428571_g5072_i0 PRJNA782551 5194 409 1.428571 5.84285539 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 324 7.54e-84   NTclustered gi|1624698156|ref|XM_029013946.1| 189622 g5072 i0 83.714 0.855745721271394 350 50 86 6 5 354 343 1 Babesia ovata CTP synthase, putative (BOVATA_050290), partial mRNA blastn 350 324 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;