contig_metadata
4 rows where bioproject = "PRJNA782235" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26673409 | 26673409 | PRJNA782235_P_NODE_19361_length_249_cov_0.875000_g19172_i0 | PRJNA782235 | 19361 | 249 | 0.875 | 2.17875 | Roseisolibacter sp. H3M3-2 | 3031323 | Bacteria | Bacteria | 43.5 | 0.014 | NR | WP_275829784.1 | 3031323 | g19172 | i0 | 58.1 | 0.518072289156627 | 43 | 14 | 51.8 | 1 | 131 | 3 | 9 | 47 | WP_275829784.1 DsbA family protein [Roseisolibacter sp. H3M3-2] | diamond | 129 | 43.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Roseisolibacter | Roseisolibacter sp. H3M3-2 | |
| 28064270 | 28064270 | PRJNA782235_P_NODE_19165_length_249_cov_0.875000_g18976_i0 | PRJNA782235 | 19165 | 249 | 0.875 | 2.17875 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 143 | 1.33e-38 | NR | HEX6589341.1 | 2910168 | g18976 | i0 | 88.8 | 0.963855421686747 | 80 | 9 | 96.4 | 0 | 248 | 9 | 355 | 434 | HEX6589341.1 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO [Longimicrobiales bacterium] | diamond | 240 | 143 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 30148170 | 30148170 | PRJNA782235_P_NODE_18632_length_249_cov_0.875000_g18443_i0 | PRJNA782235 | 18632 | 249 | 0.875 | 2.17875 | Gemmatimonadetes bacterium T265 | 2839016 | Bacteria | Bacteria | 107 | 7.14e-25 | NR | GJG86285.1 | 2839016 | g18443 | i0 | 88.6 | 1.8433734939759 | 70 | 8 | 84.3 | 0 | 249 | 40 | 308 | 377 | GJG86285.1 heme ABC transporter ATPase [Gemmatimonadetes bacterium T265] | diamond | 459 | 107 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadetes bacterium T265 | |||||
| 31222438 | 31222438 | PRJNA782235_P_NODE_10955_length_283_cov_1.466667_g10766_i0 | PRJNA782235 | 10955 | 283 | 1.466667 | 4.15066761 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 146 | 1.5899999999999999e-40 | NR | HWK90258.1 | 2029185 | g10766 | i0 | 80.9 | 0.996466431095406 | 94 | 18 | 99.6 | 0 | 1 | 282 | 158 | 251 | HWK90258.1 AI-2E family transporter [Longimicrobium sp.] | diamond | 282 | 146 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;