RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA782235", tax_clade = "Sar" and tax_phylum = "Ciliophora"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA782235 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4591787 4591787 PRJNA782235_P_NODE_4904_length_394_cov_2.401869_g4715_i0 PRJNA782235 4904 394 2.401869 9.46336386 Thuricola similis 2784598 SAR_Eukaryotes SAR_Eukaryotes 246 1.61e-60   NTclustered gi|2088246216|ref|NC_057079.1| 2784598 g4715 i0 90.052 41.2284263959391 191 17 48 1 205 393 12012 12202 Thuricola similis strain CUIT mitochondrion, complete genome blastn 16244 246 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vaginicolidae Thuricola Thuricola similis
21165839 21165839 PRJNA782235_P_NODE_15937_length_252_cov_1.687151_g15748_i0 PRJNA782235 15937 252 1.687151 4.25162052 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 106 9.83e-25   NR OMJ72884.1 5963 g15748 i0 61.9 3.96428571428571 84 32 100 0 1 252 293 376 OMJ72884.1 hypothetical protein SteCoe_28576 [Stentor coeruleus] diamond 999 106 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;