RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA782235", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA782235 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3764102 3764102 PRJNA782235_P_NODE_5863_length_364_cov_1.061856_g5674_i0 PRJNA782235 5863 364 1.061856 3.86515584 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 540 6.049999999999999e-149   NTclustered gi|833494855|ref|XM_012915027.1| 5866 g5674 i0 94.118 1078.76373626374 357 18 98 2 8 364 466 113 Babesia bigemina hypothetical protein, conserved partial mRNA blastn 392670 545 0.990825688073395 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
18614936 18614936 PRJNA782235_P_NODE_1915_length_713_cov_1.792188_g1734_i0 PRJNA782235 1915 713 1.792188 12.77830044 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 1243 0   NTclustered gi|1624698158|ref|XM_029013947.1| 189622 g1734 i0 98.174 676.441795231417 712 13 99 0 1 712 75 786 Babesia ovata endonuclease-reverse transcriptase (BOVATA_050300), partial mRNA blastn 482303 1243 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
18615087 18615087 PRJNA782235_P_NODE_4675_length_405_cov_4.352410_g4486_i0 PRJNA782235 4675 405 4.35241 17.6272605 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 171 1.0299999999999998e-37   NTclustered gi|1624698156|ref|XM_029013946.1| 189622 g4486 i0 84.27 0.439506172839506 178 25 44 3 224 401 1 175 Babesia ovata CTP synthase, putative (BOVATA_050290), partial mRNA blastn 178 171 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
28885145 28885145 PRJNA782235_P_NODE_20368_length_248_cov_0.880000_g20179_i0 PRJNA782235 20368 248 0.88 2.1824 Plasmodium sp. DRC-Itaito 720590 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.00847   NR SOV22472.1 720590 g20179 i0 36 0.604838709677419 50 32 60.5 0 162 13 446 495 SOV22472.1 selenide water dikinase, putative [Plasmodium sp. DRC-Itaito] diamond 150 44.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. DRC-Itaito

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;