RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA782235", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA782235 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16065753 16065753 PRJNA782235_P_NODE_18613_length_249_cov_0.875000_g18424_i0 PRJNA782235 18613 249 0.875 2.17875 Eunicella cavolini 317547 Cnidaria other_Eukaryota 52.8 0.023   NTclustered gi|2918369538|emb|OZ237720.1| 317547 g18424 i0 100 0.112449799196787 28 0 11 0 15 42 31038405 31038432 Eunicella cavolini genome assembly, chromosome: 4 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
26800361 26800361 PRJNA782235_P_NODE_15801_length_253_cov_1.494444_g15612_i0 PRJNA782235 15801 253 1.494444 3.78094332 Myxobolus squamalis 59785 Cnidaria other_Eukaryota 114 4.38e-31   NR KAF1741074.1 59785 g15612 i0 67.9 0.924901185770751 78 25 92.5 0 235 2 1 78 KAF1741074.1 hypothetical protein MXB_672, partial [Myxobolus squamalis] diamond 234 114 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Myxobolus Myxobolus squamalis
30875078 30875078 PRJNA782235_P_NODE_13674_length_266_cov_1.559585_g13485_i0 PRJNA782235 13674 266 1.559585 4.1484961 Dendronephthya gigantea 151771 Cnidaria other_Eukaryota 79.3 1.91e-16   NR XP_028390691.1 151771 g13485 i0 46.7 1.66917293233083 75 40 84.6 0 6 230 75 149 XP_028390691.1 ADP-ribose glycohydrolase OARD1-like [Dendronephthya gigantea] diamond 444 79.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;