RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA782235", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA782235 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17790050 17790050 PRJNA782235_P_NODE_22134_length_246_cov_0.890173_g21945_i0 PRJNA782235 22134 246 0.890173 2.18982558 Pseudomonadati 3379134 Bacteria Bacteria 399 6.889999999999999e-107   NTclustered gi|1938788434|gb|CP054181.1| 2053306 g21945 i0 95.935 2 246 10 100 0 1 246 1008485 1008730 Ignavibacteria bacterium isolate H1_BAC2 chromosome blastn 492 399 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
32614390 32614390 PRJNA782235_P_NODE_11740_length_278_cov_1.458537_g11551_i0 PRJNA782235 11740 278 1.458537 4.05473286 Stygiobacter sp. 3081216 Bacteria Bacteria 107 7.54e-26   NR KAF0142147.1 3081216 g11551 i0 72.4 2.58992805755396 76 21 82 0 49 276 17 92 KAF0142147.1 MAG: anti-sigma-factor antagonist [Stygiobacter sp.] diamond 720 107 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae Stygiobacter Stygiobacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;