RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA782235", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA782235 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5866875 5866875 PRJNA782235_P_NODE_24945_length_244_cov_0.900585_g24756_i0 PRJNA782235 24945 244 0.900585 2.1974274 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 155 4.5299999999999986e-43   NR HRI87450.1 2030809 g24756 i0 82.7 2.98770491803279 81 14 99.6 0 244 2 183 263 HRI87450.1 sulfatase [Candidatus Hydrogenedentota bacterium] diamond 729 155 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
31254236 31254236 PRJNA782235_P_NODE_21035_length_247_cov_0.885057_g20846_i0 PRJNA782235 21035 247 0.885057 2.18609079 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 95.5 8.939999999999999e-23   NR MBI2432570.1 2030809 g20846 i0 55.1 1.89473684210526 78 35 94.7 0 246 13 14 91 MBI2432570.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 468 95.5 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;