contig_metadata
3 rows where bioproject = "PRJNA781453" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29201139 | 29201139 | PRJNA781453_P_NODE_2449_length_925_cov_1.623239_g2369_i0 | PRJNA781453 | 2449 | 925 | 1.623239 | 15.01496075 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 120 | 2.26e-30 | NR | MFO7729640.1 | 2053615 | g2369 | i0 | 62.6 | 0.295135135135135 | 91 | 33 | 29.2 | 1 | 446 | 177 | 11 | 101 | MFO7729640.1 hypothetical protein [Spirochaetia bacterium] | diamond | 273 | 120 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 31823481 | 31823481 | PRJNA781453_P_NODE_34737_length_248_cov_0.880000_g34622_i0 | PRJNA781453 | 34737 | 248 | 0.88 | 2.1824 | Brachyspira aalborgi | 29522 | Bacteria | Bacteria | 120 | 9.21e-30 | NR | WP_147526710.1 | 29522 | g34622 | i0 | 89.6 | 0.810483870967742 | 67 | 7 | 81 | 0 | 203 | 3 | 2 | 68 | WP_147526710.1 RNA polymerase sigma factor RpoD [Brachyspira aalborgi] | diamond | 201 | 120 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira aalborgi | ||
| 32076747 | 32076747 | PRJNA781453_P_NODE_4738_length_687_cov_1.850163_g4633_i0 | PRJNA781453 | 4738 | 687 | 1.850163 | 12.71061981 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 149 | 2.7299999999999993e-42 | NR | MFO7729640.1 | 2053615 | g4633 | i0 | 91.4 | 0.353711790393013 | 81 | 6 | 35.4 | 1 | 444 | 686 | 9 | 88 | MFO7729640.1 hypothetical protein [Spirochaetia bacterium] | diamond | 243 | 149 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;