RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA781453", tax_clade = "Opisthokonta" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA781453 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10966462 10966462 PRJNA781453_P_NODE_18249_length_342_cov_0.970260_g18134_i0 PRJNA781453 18249 342 0.97026 3.3182892 Philodina citrina 468664 Rotifera other_Eukaryota 377 4.7e-100   NTclustered gi|407227484|emb|FR856884.1| 468664 g18134 i0 87.688 4.76608187134503 333 29 96 10 2 328 2045 2371 Philodina citrina complete mitochondrial genome blastn 1630 377 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
26736659 26736659 PRJNA781453_P_NODE_40681_length_241_cov_0.916667_g40566_i0 PRJNA781453 40681 241 0.916667 2.20916747 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 140 5.09e-38   NR CAF1499030.1 392030 g40566 i0 82.3 5.90041493775934 79 14 98.3 0 239 3 294 372 CAF1499030.1 unnamed protein product [Rotaria magnacalcarata] diamond 1422 140 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
32054342 32054342 PRJNA781453_P_NODE_2238_length_961_cov_2.904279_g2165_i0 PRJNA781453 2238 961 2.904279 27.91012119 Rotaria 231623 Rotifera other_Eukaryota 53.9 6.08e-4   NR CAF2140627.1 392030 g2165 i0 48.4 0.739854318418314 62 30 19.4 1 27 212 402 461 CAF2140627.1 unnamed protein product, partial [Rotaria magnacalcarata] diamond 711 53.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;