RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA781453", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA781453 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13516681 13516681 PRJNA781453_P_NODE_35931_length_247_cov_0.885057_g35816_i0 PRJNA781453 35931 247 0.885057 2.18609079 Eunicella cavolini 317547 Cnidaria other_Eukaryota 60.2 1.33e-4   NTclustered gi|2918369537|emb|OZ237719.1| 317547 g35816 i0 100 0.259109311740891 32 0 13 0 101 132 17309315 17309284 Eunicella cavolini genome assembly, chromosome: 3 blastn 64 60.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
26736658 26736658 PRJNA781453_P_NODE_34281_length_249_cov_0.875000_g34166_i0 PRJNA781453 34281 249 0.875 2.17875 Actinostola sp. cb2 3060491 Cnidaria other_Eukaryota 85.5 3.58e-17   NR KAK3719407.1 3060491 g34166 i0 45.1 3.62650602409639 82 44 97.6 1 248 6 859 940 KAK3719407.1 hypothetical protein QZH41_004699 [Actinostola sp. cb2023] diamond 903 85.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actinostolidae Actinostola Actinostola sp. cb2023
30558902 30558902 PRJNA781453_P_NODE_26373_length_282_cov_1.397129_g26258_i0 PRJNA781453 26373 282 1.397129 3.93990378 Pocillopora damicornis 46731 Cnidaria other_Eukaryota 61.2 7.69e-9   NR RMX37815.1 46731 g26258 i0 39.7 0.776595744680851 73 44 77.7 0 60 278 61 133 RMX37815.1 hypothetical protein pdam_00020033 [Pocillopora damicornis] diamond 219 61.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;