RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA781453" and tax_clade = "Bacteria candidate phyla"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA781453 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2039133 2039133 PRJNA781453_P_NODE_9122_length_496_cov_0.966903_g9008_i0 PRJNA781453 9122 496 0.966903 4.79583888 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 839 0   NTclustered gi|2070586293|gb|CP076101.2| 1917697 g9008 i0 97.183 2.94556451612903 497 13 100 1 1 496 461911 461415 MAG: Candidatus Saccharimonas sp. isolate JCVI_32_bin.49 chromosome, complete genome blastn 1461 839 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
27147982 27147982 PRJNA781453_P_NODE_802_length_1417_cov_2.961310_g763_i0 PRJNA781453 802 1417 2.96131 41.9617627 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 217 1.5100000000000001e-59   NR MCG5105732.1 2026720 g763 i0 40.3 0.677487649964714 320 173 64.6 8 498 1412 8 324 MCG5105732.1 protein kinase [Candidatus Saccharibacteria bacterium] diamond 960 217 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27938115 27938115 PRJNA781453_P_NODE_32925_length_250_cov_0.870056_g32810_i0 PRJNA781453 32925 250 0.870056 2.17514 Patescibacteria group bacterium 2052139 Bacteria Bacteria 42 0.0292   NR MDQ5982705.1 2052139 g32810 i0 32.4 0.816 68 45 81.6 1 219 16 27 93 MDQ5982705.1 hypothetical protein [Patescibacteria group bacterium] diamond 204 42 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28758875 28758875 PRJNA781453_P_NODE_26187_length_283_cov_1.442857_g26072_i0 PRJNA781453 26187 283 1.442857 4.08328531 Candidatus Magasanikiibacteriota bacterium 2026717 Bacteria Bacteria 43.9 0.0198   NR HRY36428.1 2026717 g26072 i0 33.3 0.954063604240283 90 39 74.2 5 48 257 4 92 HRY36428.1 prepilin peptidase [Candidatus Magasanikiibacteriota bacterium] diamond 270 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Magasanikiibacteriota         Candidatus Magasanikiibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;