RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA781427", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA781427 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3312141 3312141 PRJNA781427_P_NODE_50963_length_315_cov_2.380165_g50080_i0 PRJNA781427 50963 315 2.380165 7.49751975 Pyrobaculum calidifontis 181486 Archaea Archaea 54.7 0.008   NTclustered gi|126248349|gb|CP000561.1| 410359 g50080 i0 94.286 0.111111111111111 35 2 11 0 257 291 1279318 1279284 Pyrobaculum calidifontis JCM 11548, complete genome blastn 35 54.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum calidifontis
31001522 31001522 PRJNA781427_P_NODE_44494_length_340_cov_1.719101_g43611_i0 PRJNA781427 44494 340 1.719101 5.8449434 Thermoproteus sp. CP8 2268139 Archaea Archaea 43.9 0.0269   NR WP_081245632.1 1650659 g43611 i0 40.7 0.520588235294118 59 35 52.1 0 150 326 32 90 WP_081245632.1 hypothetical protein [Thermoproteus sp. CP80] diamond 177 43.9 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Thermoproteus Thermoproteus sp. CP80

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;