contig_metadata
25 rows where bioproject = "PRJNA781427" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2487001 | 2487001 | PRJNA781427_P_NODE_24922_length_475_cov_1.912935_g24043_i0 | PRJNA781427 | 24922 | 475 | 1.912935 | 9.08644125 | Lawsonia | 41707 | Bacteria | Bacteria | 706 | 0 | NTclustered | gi|2318587541|gb|CP107054.1| | 29546 | g24043 | i0 | 93.474 | 239.408421052632 | 475 | 31 | 100 | 0 | 1 | 475 | 654919 | 655393 | Lawsonia intracellularis strain PPE-GX01-2022 chromosome, complete genome | blastn | 113719 | 706 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Lawsonia | Lawsonia intracellularis | ||
| 11415401 | 11415401 | PRJNA781427_P_NODE_22189_length_509_cov_3.137615_g21313_i0 | PRJNA781427 | 22189 | 509 | 3.137615 | 15.97046035 | Lawsonia | 41707 | Bacteria | Bacteria | 678 | 0 | NTclustered | gi|2318587541|gb|CP107054.1| | 29546 | g21313 | i0 | 90.784 | 227.872298624754 | 510 | 43 | 100 | 4 | 1 | 509 | 655689 | 656195 | Lawsonia intracellularis strain PPE-GX01-2022 chromosome, complete genome | blastn | 115987 | 678 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Lawsonia | Lawsonia intracellularis | ||
| 21614210 | 21614210 | PRJNA781427_P_NODE_72937_length_253_cov_2.455556_g72053_i0 | PRJNA781427 | 72937 | 253 | 2.455556 | 6.21255668 | Lawsonia | 41707 | Bacteria | Bacteria | 381 | 2.5799999999999995e-101 | NTclustered | gi|2318587541|gb|CP107054.1| | 29546 | g72053 | i0 | 93.75 | 112.786561264822 | 256 | 12 | 100 | 2 | 1 | 253 | 655399 | 655653 | Lawsonia intracellularis strain PPE-GX01-2022 chromosome, complete genome | blastn | 28535 | 381 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Lawsonia | Lawsonia intracellularis | ||
| 21614280 | 21614280 | PRJNA781427_P_NODE_83077_length_247_cov_0.885057_g82193_i0 | PRJNA781427 | 83077 | 247 | 0.885057 | 2.18609079 | Lawsonia intracellularis | 29546 | Bacteria | Bacteria | 132 | 1.03e-33 | NR | WP_011526701.1 | 29546 | g82193 | i0 | 80.2 | 0.983805668016194 | 81 | 16 | 98.4 | 0 | 245 | 3 | 444 | 524 | WP_011526701.1 ATP-dependent Clp protease ATP-binding subunit ClpA [Lawsonia intracellularis] | diamond | 243 | 132 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Lawsonia | Lawsonia intracellularis | ||
| 26800347 | 26800347 | PRJNA781427_P_NODE_74761_length_251_cov_0.865169_g73877_i0 | PRJNA781427 | 74761 | 251 | 0.865169 | 2.17157419 | Desulfobulbus sp. AH-315-M07 | 2814557 | Bacteria | Bacteria | 78.6 | 9.9e-15 | NR | MBN4050169.1 | 2814557 | g73877 | i0 | 51.2 | 1.02788844621514 | 86 | 38 | 98 | 4 | 2 | 247 | 477 | 562 | MBN4050169.1 multicopper oxidase family protein [Desulfobulbus sp. AH-315-M07] | diamond | 258 | 78.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfobulbus | Desulfobulbus sp. AH-315-M07 | ||
| 27211416 | 27211416 | PRJNA781427_P_NODE_81562_length_248_cov_0.880000_g80678_i0 | PRJNA781427 | 81562 | 248 | 0.88 | 2.1824 | Desulfobacteraceae bacterium Eth-SRB1 | 2528437 | Bacteria | Bacteria | 157 | 1.5e-44 | NR | RZB30017.1 | 2528437 | g80678 | i0 | 97.6 | 0.991935483870968 | 82 | 2 | 99.2 | 0 | 1 | 246 | 112 | 193 | RZB30017.1 MAG: hypothetical protein SRB1_02297 [Desulfobacteraceae bacterium Eth-SRB1] | diamond | 246 | 157 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacteraceae bacterium Eth-SRB1 | |||
| 27338180 | 27338180 | PRJNA781427_P_NODE_83643_length_247_cov_0.885057_g82759_i0 | PRJNA781427 | 83643 | 247 | 0.885057 | 2.18609079 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 155 | 9.41e-42 | NR | MEA3279567.1 | 2202153 | g82759 | i0 | 91.4 | 0.983805668016194 | 81 | 7 | 98.4 | 0 | 246 | 4 | 917 | 997 | MEA3279567.1 DNA polymerase III subunit alpha [Thermodesulfobacteriota bacterium] | diamond | 243 | 155 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 27369961 | 27369961 | PRJNA781427_P_NODE_81683_length_248_cov_0.880000_g80799_i0 | PRJNA781427 | 81683 | 248 | 0.88 | 2.1824 | Geobacteraceae bacterium | 2282154 | Bacteria | Bacteria | 73.2 | 3.62e-13 | NR | HZV81153.1 | 2282154 | g80799 | i0 | 73.1 | 0.629032258064516 | 52 | 13 | 62.9 | 1 | 243 | 88 | 239 | 289 | HZV81153.1 CopD family protein [Geobacteraceae bacterium] | diamond | 156 | 73.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacteraceae bacterium | |||
| 27401364 | 27401364 | PRJNA781427_P_NODE_94023_length_242_cov_0.911243_g93139_i0 | PRJNA781427 | 94023 | 242 | 0.911243 | 2.20520806 | Desulfobacter postgatei | 2293 | Bacteria | Bacteria | 151 | 1.41e-41 | NR | WP_289021737.1 | 2293 | g93139 | i0 | 92.5 | 1.98347107438017 | 80 | 6 | 99.2 | 0 | 241 | 2 | 185 | 264 | WP_289021737.1 sugar transferase [Desulfobacter postgatei] | diamond | 480 | 151 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacter | Desulfobacter postgatei | ||
| 27590915 | 27590915 | PRJNA781427_P_NODE_93564_length_242_cov_0.911243_g92680_i0 | PRJNA781427 | 93564 | 242 | 0.911243 | 2.20520806 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 124 | 7.31e-31 | NR | MFC1890708.1 | 2202153 | g92680 | i0 | 67.5 | 1.95867768595041 | 80 | 26 | 99.2 | 0 | 3 | 242 | 284 | 363 | MFC1890708.1 MopE-related protein [Thermodesulfobacteriota bacterium] | diamond | 474 | 124 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 27748828 | 27748828 | PRJNA781427_P_NODE_86504_length_246_cov_0.890173_g85620_i0 | PRJNA781427 | 86504 | 246 | 0.890173 | 2.18982558 | Candidatus Dadabacteria bacterium | 2080303 | Bacteria | Bacteria | 71.6 | 2.93e-13 | NR | RME59244.1 | 2080303 | g85620 | i0 | 43.8 | 1.98780487804878 | 80 | 43 | 96.3 | 2 | 241 | 5 | 95 | 173 | RME59244.1 MAG: phosphoribosyltransferase [Candidatus Dadabacteria bacterium] | diamond | 489 | 71.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Candidatus Dadabacteria | Candidatus Dadabacteria bacterium | |||||
| 27748834 | 27748834 | PRJNA781427_P_NODE_92884_length_243_cov_0.905882_g92000_i0 | PRJNA781427 | 92884 | 243 | 0.905882 | 2.20129326 | Desulfuromonadaceae bacterium GWC2_58_13 | 1801896 | Bacteria | Bacteria | 93.6 | 4.95e-22 | NR | OHB26106.1 | 1801896 | g92000 | i0 | 56.4 | 1.92592592592593 | 78 | 34 | 96.3 | 0 | 242 | 9 | 77 | 154 | OHB26106.1 MAG: hypothetical protein A2X84_06675 [Desulfuromonadaceae bacterium GWC2_58_13] | diamond | 468 | 93.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadaceae | Desulfuromonadaceae bacterium GWC2_58_13 | |||
| 28632854 | 28632854 | PRJNA781427_P_NODE_77647_length_250_cov_0.870056_g76763_i0 | PRJNA781427 | 77647 | 250 | 0.870056 | 2.17514 | Desulfobulbaceae bacterium | 2053307 | Bacteria | Bacteria | 84.3 | 6.77e-17 | NR | MDH4319645.1 | 2053307 | g76763 | i0 | 49.4 | 0.996 | 83 | 42 | 99.6 | 0 | 2 | 250 | 122 | 204 | MDH4319645.1 major capsid protein [Desulfobulbaceae bacterium] | diamond | 249 | 84.3 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfobulbaceae bacterium | |||
| 28664291 | 28664291 | PRJNA781427_P_NODE_80407_length_248_cov_1.320000_g79523_i0 | PRJNA781427 | 80407 | 248 | 1.32 | 3.2736 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 56.2 | 3.08e-8 | NR | MEA3429249.1 | 2202153 | g79523 | i0 | 78.8 | 0.399193548387097 | 33 | 7 | 39.9 | 0 | 45 | 143 | 12 | 44 | MEA3429249.1 hypothetical protein [Thermodesulfobacteriota bacterium] | diamond | 99 | 56.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 29421790 | 29421790 | PRJNA781427_P_NODE_82969_length_247_cov_0.885057_g82085_i0 | PRJNA781427 | 82969 | 247 | 0.885057 | 2.18609079 | Candidatus Magnetomorum sp. | 2739430 | Bacteria | Bacteria | 95.5 | 4.4e-21 | NR | MBF0449395.1 | 2739430 | g82085 | i0 | 55.6 | 6.88663967611336 | 81 | 36 | 98.4 | 0 | 245 | 3 | 72 | 152 | MBF0449395.1 hypothetical protein [Candidatus Magnetomorum sp.] | diamond | 1701 | 95.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Candidatus Magnetomoraceae | Candidatus Magnetomorum | Candidatus Magnetomorum sp. | ||
| 29778550 | 29778550 | PRJNA781427_P_NODE_53471_length_307_cov_0.987179_g52588_i0 | PRJNA781427 | 53471 | 307 | 0.987179 | 3.03063953 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 65.1 | 1.11e-9 | NR | OKY76955.1 | 1920419 | g52588 | i0 | 69.6 | 1.00651465798046 | 46 | 14 | 45 | 0 | 169 | 306 | 1 | 46 | OKY76955.1 MAG: DNA helicase II [Desulfobulbaceae bacterium DB1] | diamond | 309 | 65.1 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfobulbaceae bacterium DB1 | |||
| 29800784 | 29800784 | PRJNA781427_P_NODE_91371_length_243_cov_0.905882_g90487_i0 | PRJNA781427 | 91371 | 243 | 0.905882 | 2.20129326 | Desulfomonile sp. | 2793219 | Bacteria | Bacteria | 44.3 | 0.0107 | NR | MEI6134931.1 | 2793219 | g90487 | i0 | 57.6 | 0.407407407407407 | 33 | 14 | 40.7 | 0 | 231 | 133 | 458 | 490 | MEI6134931.1 hypothetical protein [Desulfomonile sp.] | diamond | 99 | 44.3 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfomonilia | Desulfomonilales | Desulfomonilaceae | Desulfomonile | Desulfomonile sp. | ||
| 30211380 | 30211380 | PRJNA781427_P_NODE_89952_length_244_cov_0.900585_g89068_i0 | PRJNA781427 | 89952 | 244 | 0.900585 | 2.1974274 | Solidesulfovibrio carbinoliphilus | 345370 | Bacteria | Bacteria | 64.7 | 5.7e-10 | NR | WP_009179943.1 | 345370 | g89068 | i0 | 60.4 | 2.85245901639344 | 48 | 19 | 59 | 0 | 81 | 224 | 218 | 265 | WP_009179943.1 glycosyltransferase family protein [Solidesulfovibrio carbinoliphilus] | diamond | 696 | 64.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Solidesulfovibrio | Solidesulfovibrio carbinoliphilus | ||
| 30473800 | 30473800 | PRJNA781427_P_NODE_88153_length_245_cov_0.895349_g87269_i0 | PRJNA781427 | 88153 | 245 | 0.895349 | 2.19360505 | Desulfobacter | 2289 | Bacteria | Bacteria | 162 | 1.82e-48 | NR | WP_245531932.1 | 2293 | g87269 | i0 | 96.3 | 1.98367346938776 | 81 | 3 | 99.2 | 0 | 245 | 3 | 62 | 142 | WP_245531932.1 hypothetical protein [Desulfobacter postgatei] | diamond | 486 | 162 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacter | Desulfobacter postgatei | ||
| 30843576 | 30843576 | PRJNA781427_P_NODE_81894_length_248_cov_0.880000_g81010_i0 | PRJNA781427 | 81894 | 248 | 0.88 | 2.1824 | Desulfobacteraceae bacterium | 2049433 | Bacteria | Bacteria | 148 | 4.16e-41 | NR | NQT10186.1 | 2049433 | g81010 | i0 | 93.9 | 0.991935483870968 | 82 | 5 | 99.2 | 0 | 2 | 247 | 265 | 346 | NQT10186.1 AmpG family muropeptide MFS transporter [Desulfobacteraceae bacterium] | diamond | 246 | 148 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacteraceae bacterium | |||
| 30843585 | 30843585 | PRJNA781427_P_NODE_96714_length_241_cov_0.916667_g95830_i0 | PRJNA781427 | 96714 | 241 | 0.916667 | 2.20916747 | Desulfobacterales bacterium | 2044940 | Bacteria | Bacteria | 154 | 9.17e-46 | NR | MBT9440046.1 | 2044940 | g95830 | i0 | 96.3 | 0.995850622406639 | 80 | 3 | 99.6 | 0 | 241 | 2 | 67 | 146 | MBT9440046.1 GNAT family N-acetyltransferase [Desulfobacterales bacterium] | diamond | 240 | 154 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium | ||||
| 30970003 | 30970003 | PRJNA781427_P_NODE_79894_length_249_cov_0.875000_g79010_i0 | PRJNA781427 | 79894 | 249 | 0.875 | 2.17875 | Desulfatirhabdium butyrativorans | 340467 | Bacteria | Bacteria | 115 | 1.03e-27 | NR | WP_028324165.1 | 340467 | g79010 | i0 | 73.7 | 0.91566265060241 | 76 | 20 | 91.6 | 0 | 247 | 20 | 567 | 642 | WP_028324165.1 ATP-binding protein [Desulfatirhabdium butyrativorans] | diamond | 228 | 115 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfatirhabdiaceae | Desulfatirhabdium | Desulfatirhabdium butyrativorans | ||
| 31728610 | 31728610 | PRJNA781427_P_NODE_87697_length_245_cov_0.895349_g86813_i0 | PRJNA781427 | 87697 | 245 | 0.895349 | 2.19360505 | Desulfobacteraceae bacterium | 2049433 | Bacteria | Bacteria | 152 | 5.799999999999999e-43 | NR | HBF43371.1 | 2049433 | g86813 | i0 | 93.8 | 3.96734693877551 | 81 | 5 | 99.2 | 0 | 244 | 2 | 228 | 308 | HBF43371.1 amino acid ABC transporter permease [Desulfobacteraceae bacterium] | diamond | 972 | 152 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacteraceae bacterium | |||
| 31991027 | 31991027 | PRJNA781427_P_NODE_63238_length_279_cov_1.121359_g62354_i0 | PRJNA781427 | 63238 | 279 | 1.121359 | 3.12859161 | Bacteria | 2 | Bacteria | Bacteria | 177 | 1.19e-53 | NR | MCK4469513.1 | 2044940 | g62354 | i0 | 93.5 | 3 | 93 | 6 | 100 | 0 | 1 | 279 | 159 | 251 | MCK4469513.1 envelope biogenesis factor ElyC [Desulfobacterales bacterium] | diamond | 837 | 178 | 0.99438202247191 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium | ||||
| 32645551 | 32645551 | PRJNA781427_P_NODE_85780_length_246_cov_0.890173_g84896_i0 | PRJNA781427 | 85780 | 246 | 0.890173 | 2.18982558 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 142 | 2.58e-37 | NR | MEA3427819.1 | 2202153 | g84896 | i0 | 86.4 | 1.97560975609756 | 81 | 11 | 98.8 | 0 | 2 | 244 | 349 | 429 | MEA3427819.1 DNA-directed RNA polymerase subunit beta' [Thermodesulfobacteriota bacterium] | diamond | 486 | 142 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;