RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA781427", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 12 ✖

tax_phylum 1

  • Negarnaviricota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA781427 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11415636 11415636 PRJNA781427_P_NODE_45649_length_335_cov_4.473282_g44766_i0 PRJNA781427 45649 335 4.473282 14.9854947 Paramyxoviridae 11158 Viruses Viruses 601 2.4999999999999993e-167   NTclustered gi|9998884|emb|AJ278914.1| 251774 g44766 i0 99.102 67.9611940298507 334 3 99 0 1 334 930 1263 Porcine parainfluenza virus mRNA for membrane protein (m gene) blastn 22767 603 0.996683250414594 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
12240976 12240976 PRJNA781427_P_NODE_68270_length_266_cov_0.854922_g67386_i0 PRJNA781427 68270 266 0.854922 2.27409252 Orthorubulavirus mammalis 3052558 Viruses Viruses 481 2.62e-131   NTclustered gi|2562721692|gb|OQ994985.1| 2905673 g67386 i0 99.248 83 266 2 100 0 1 266 7997 7732 Parainfluenza virus 5 strain GX2020, complete genome blastn 22078 481 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
12691069 12691069 PRJNA781427_P_NODE_14150_length_678_cov_1.644628_g13330_i0 PRJNA781427 14150 678 1.644628 11.15057784 Paramyxoviridae 11158 Viruses Viruses 1225 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g13330 i0 99.263 71.5545722713864 678 5 100 0 1 678 711 34 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 48514 1236 0.991100323624595 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
15240146 15240146 PRJNA781427_P_NODE_43732_length_343_cov_2.733333_g42850_i0 PRJNA781427 43732 343 2.733333 9.37533219 Orthorubulavirus 2560195 Viruses Viruses 595 1.1899999999999999e-165   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g42850 i0 97.959 80.667638483965 343 7 100 0 1 343 1800 2142 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 27669 601 0.990016638935108 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
15240525 15240525 PRJNA781427_P_NODE_85072_length_246_cov_0.890173_g84188_i0 PRJNA781427 85072 246 0.890173 2.18982558 Orthorubulavirus 2560195 Viruses Viruses 438 1.4599999999999996e-118   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g84188 i0 98.78 69.280487804878 246 3 100 0 1 246 14464 14219 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 17043 438 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
16514839 16514839 PRJNA781427_P_NODE_61613_length_283_cov_1.100000_g60729_i0 PRJNA781427 61613 283 1.1 3.113 Paramyxoviridae 11158 Viruses Viruses 518 2.14e-142   NTclustered gi|2721617856|gb|PP711545.1| 251774 g60729 i0 99.647 66.9540636042403 283 1 100 0 1 283 12730 12448 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 18948 523 0.990439770554493 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
17789213 17789213 PRJNA781427_P_NODE_23534_length_492_cov_1.873508_g22655_i0 PRJNA781427 23534 492 1.873508 9.21765936 Paramyxoviridae 11158 Viruses Viruses 898 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g22655 i0 99.593 86.1158536585366 492 2 100 0 1 492 1302 1793 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 42369 898 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
19063189 19063189 PRJNA781427_P_NODE_18175_length_577_cov_2.682540_g17318_i0 PRJNA781427 18175 577 2.68254 15.4782558 Orthorubulavirus 2560195 Viruses Viruses 1061 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g17318 i0 99.827 74.0693240901213 577 1 100 0 1 577 3422 2846 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 42738 1061 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
19063442 19063442 PRJNA781427_P_NODE_46875_length_331_cov_1.116279_g45992_i0 PRJNA781427 46875 331 1.116279 3.69488349 Orthorubulavirus 2560195 Viruses Viruses 593 4.129999999999999e-165   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g45992 i0 99.094 86.785498489426 331 2 100 1 1 331 443 772 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 28726 593 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
21163555 21163555 PRJNA781427_P_NODE_54337_length_304_cov_1.329004_g53454_i0 PRJNA781427 54337 304 1.329004 4.04017216 Betapaprhavirus frugiperda 2844304 Viruses Viruses 556 4.919999999999999e-154   NTclustered gi|1560769851|gb|MH926029.1| 1481139 g53454 i0 99.671 11 304 1 100 0 1 304 703 1006 Spodoptera frugiperda rhabdovirus, complete genome blastn 3344 556 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Betapaprhavirus Betapaprhavirus frugiperda
25438540 25438540 PRJNA781427_P_NODE_46340_length_333_cov_0.934615_g45457_i0 PRJNA781427 46340 333 0.934615 3.11226795 Orthorubulavirus 2560195 Viruses Viruses 601 2.4799999999999996e-167   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g45457 i0 99.396 67.5975975975976 331 2 99 0 3 333 3787 3457 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 22510 601 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
28380038 28380038 PRJNA781427_P_NODE_9366_length_876_cov_1.547945_g8674_i0 PRJNA781427 9366 876 1.547945 13.5599982 Wenzhou rodent rhabdovirus 1 3084690 Viruses Viruses 55.1 9.28e-5   NR WPV62747.1 3084690 g8674 i0 36.3 0.349315068493151 102 64 34.9 1 310 5 159 259 WPV62747.1 MAG: phosphoprotein [Wenzhou rodent rhabdovirus 1] diamond 306 55.1 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Wenzhou rodent rhabdovirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;