RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA781427", tax_phylum = "Lenarviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Lenarviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA781427 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17338695 17338695 PRJNA781427_P_NODE_36114_length_382_cov_1.844660_g35232_i0 PRJNA781427 36114 382 1.84466 7.0466012 Ripachij virus 3130407 Viruses Viruses 529 1.3799999999999997e-145   NTclustered gi|2717319663|gb|PP172709.1| 3130407 g35232 i0 91.623 218.225130890052 382 32 100 0 1 382 413 794 MAG: Ripachij virus isolate KCAP1_k141_392510 genomic sequence blastn 83362 529 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripachij virus
23714669 23714669 PRJNA781427_P_NODE_89919_length_244_cov_0.900585_g89035_i0 PRJNA781427 89919 244 0.900585 2.1974274 Mitovirus cefi 1 3030001 Viruses Viruses 148 2.7299999999999997e-31   NTclustered gi|2451183720|tpg|BK063054.1| 3030001 g89035 i0 95.699 0.836065573770492 93 3 38 1 6 98 1933 2024 TPA_asm: Mitovirus cefi 1 RNA-dependent RNA polymerase gene, complete cds blastn 204 148 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus cefi 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;