RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

22 rows where bioproject = "PRJNA781427", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 22 ✖

tax_kingdom 1

  • Metazoa · 22 ✖

tax_clade 1

bioproject 1

  • PRJNA781427 · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3312027 3312027 PRJNA781427_P_NODE_46563_length_332_cov_1.189189_g45680_i0 PRJNA781427 46563 332 1.189189 3.94810748 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 62.1 5.2e-5   NTclustered gi|1752368665|ref|XM_030988512.1| 7668 g45680 i0 88.679 1.44277108433735 53 3 15 3 129 178 3137 3189 PREDICTED: Strongylocentrotus purpuratus protein inscuteable homolog (LOC755119), transcript variant X3, mRNA blastn 479 62.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
8413164 8413164 PRJNA781427_P_NODE_19407_length_553_cov_1.495833_g18544_i0 PRJNA781427 19407 553 1.495833 8.27195649 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 78.7 8.98e-10   NTclustered gi|1752394043|ref|XM_030999247.1| 7668 g18544 i0 94.231 1.58408679927667 52 2 9 1 78 129 3339 3289 PREDICTED: Strongylocentrotus purpuratus transmembrane protein 62 (LOC585983), transcript variant X2, mRNA blastn 876 78.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
8414255 8414255 PRJNA781427_P_NODE_61247_length_284_cov_1.094787_g60363_i0 PRJNA781427 61247 284 1.094787 3.10919508 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 52.8 0.026   NTclustered gi|1752407301|ref|XM_030975710.1| 7668 g60363 i0 100 0.197183098591549 28 0 10 0 9 36 10394 10421 PREDICTED: Strongylocentrotus purpuratus hydrocephalus-inducing protein homolog (LOC576233), mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
8414500 8414500 PRJNA781427_P_NODE_707_length_2755_cov_5.305369_g638_i0 PRJNA781427 707 2755 5.305369 146.16291595 Acanthaster planci 133434 Echinodermata other_Eukaryota 239 4.07e-65   NR XP_022102187.1 133434 g638 i0 39.5 0.388747731397459 357 197 37.9 8 234 1277 17 363 XP_022102187.1 membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase-like [Acanthaster planci] diamond 1071 239 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
8865002 8865002 PRJNA781427_P_NODE_57027_length_295_cov_2.360360_g56143_i0 PRJNA781427 57027 295 2.36036 6.963062 Acanthaster planci 133434 Echinodermata other_Eukaryota 71.2 6.41e-13   NR XP_022107964.1 133434 g56143 i0 54.3 1.47457627118644 46 21 46.8 0 290 153 3 48 XP_022107964.1 neurogenic locus protein delta-like [Acanthaster planci] diamond 435 71.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
10964407 10964407 PRJNA781427_P_NODE_27849_length_444_cov_1.598383_g26968_i0 PRJNA781427 27849 444 1.598383 7.09682052 Anneissia japonica 1529436 Echinodermata other_Eukaryota 715 0   NTclustered gi|1826640151|ref|XM_033252220.1| 1529436 g26968 i0 95.721 18.1869369369369 444 19 100 0 1 444 602 1045 PREDICTED: Anneissia japonica tigger transposable element-derived protein 4-like (LOC117109799), mRNA blastn 8075 715 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
12241479 12241479 PRJNA781427_P_NODE_88450_length_245_cov_0.895349_g87566_i0 PRJNA781427 88450 245 0.895349 2.19360505 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 93.5 1.3e-14   NTclustered gi|1752394272|ref|XM_011670039.2| 7668 g87566 i0 86.047 45.0285714285714 86 12 35 0 91 176 1856 1941 PREDICTED: Strongylocentrotus purpuratus proton-coupled folate transporter (LOC753373), transcript variant X1, mRNA blastn 11032 93.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
16063523 16063523 PRJNA781427_P_NODE_55653_length_300_cov_0.995595_g54770_i0 PRJNA781427 55653 300 0.995595 2.986785 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 65.8 3.58e-6   NTclustered gi|1752394043|ref|XM_030999247.1| 7668 g54770 i0 88.889 1.76333333333333 54 4 18 2 33 86 3288 3339 PREDICTED: Strongylocentrotus purpuratus transmembrane protein 62 (LOC585983), transcript variant X2, mRNA blastn 529 65.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
19887101 19887101 PRJNA781427_P_NODE_27476_length_448_cov_1.160000_g26595_i0 PRJNA781427 27476 448 1.16 5.1968 Asterias rubens 7604 Echinodermata other_Eukaryota 220 1.12e-52   NTclustered gi|1834251991|ref|XM_033790822.1| 7604 g26595 i0 84.932 21.6473214285714 219 32 49 1 195 412 315 97 PREDICTED: Asterias rubens NEDD8 (LOC117305973), mRNA blastn 9698 220 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
23713364 23713364 PRJNA781427_P_NODE_38039_length_371_cov_1.469799_g37157_i0 PRJNA781427 38039 371 1.469799 5.45295429 Anneissia japonica 1529436 Echinodermata other_Eukaryota 52.8 0.035   NTclustered gi|1826640117|ref|XR_004445594.1| 1529436 g37157 i0 100 0.150943396226415 28 0 8 0 148 175 335 308 PREDICTED: Anneissia japonica uncharacterized LOC117109783 (LOC117109783), transcript variant X1, ncRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
23714764 23714764 PRJNA781427_P_NODE_94239_length_242_cov_0.911243_g93355_i0 PRJNA781427 94239 242 0.911243 2.20520806 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 71.3 6.02e-8   NTclustered gi|1752394043|ref|XM_030999247.1| 7668 g93355 i0 97.561 2.71074380165289 41 1 17 0 7 47 3328 3288 PREDICTED: Strongylocentrotus purpuratus transmembrane protein 62 (LOC585983), transcript variant X2, mRNA blastn 656 71.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
24163674 24163674 PRJNA781427_P_NODE_74299_length_251_cov_0.865169_g73415_i0 PRJNA781427 74299 251 0.865169 2.17157419 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 99.8 3.67e-22   NR KAJ8041496.1 206669 g73415 i0 53.1 0.968127490039841 81 38 96.8 0 7 249 603 683 KAJ8041496.1 hypothetical protein HOLleu_12326 [Holothuria leucospilota] diamond 243 99.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
27685692 27685692 PRJNA781427_P_NODE_15064_length_652_cov_1.338515_g14234_i0 PRJNA781427 15064 652 1.338515 8.7271178 Acanthaster planci 133434 Echinodermata other_Eukaryota 46.6 0.0483   NR XP_022093161.1 133434 g14234 i0 24.2 0.552147239263804 120 89 54.3 2 297 650 170 289 XP_022093161.1 DNA polymerase alpha subunit B-like [Acanthaster planci] diamond 360 46.6 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
29021180 29021180 PRJNA781427_P_NODE_64228_length_276_cov_1.502463_g63344_i0 PRJNA781427 64228 276 1.502463 4.14679788 Metazoa 33208 Echinodermata other_Eukaryota 62.8 5.04e-9   NR XP_033636803.1 7604 g63344 i0 59.5 2.27173913043478 42 17 45.7 0 4 129 239 280 XP_033636803.1 usherin-like [Asterias rubens] diamond 627 63.2 0.993670886075949 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
29494462 29494462 PRJNA781427_P_NODE_18430_length_572_cov_1.647295_g17573_i0 PRJNA781427 18430 572 1.647295 9.4225274 Metazoa 33208 Echinodermata other_Eukaryota 86.3 2.62e-17   NR XP_786640.2 7668 g17573 i0 33.1 5.80594405594406 154 97 77.6 1 452 9 20 173 XP_786640.2 dynactin subunit 6 [Strongylocentrotus purpuratus] diamond 3321 87 0.991954022988506 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
30211358 30211358 PRJNA781427_P_NODE_53472_length_307_cov_0.987179_g52589_i0 PRJNA781427 53472 307 0.987179 3.03063953 Anneissia japonica 1529436 Echinodermata other_Eukaryota 91.7 2.96e-20   NR XP_033118423.1 1529436 g52589 i0 45.8 1.87622149837134 96 51 93.8 1 3 290 50 144 XP_033118423.1 ubiquitin carboxyl-terminal hydrolase isozyme L3-like isoform X1 [Anneissia japonica] diamond 576 91.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
30811800 30811800 PRJNA781427_P_NODE_174_length_4245_cov_6.279962_g158_i0 PRJNA781427 174 4245 6.279962 266.5843869 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 110 4.37e-20   NR KAJ8038071.1 206669 g158 i0 23 0.68904593639576 553 338 37 22 733 2304 1913 2406 KAJ8038071.1 Neurogenic locus notch-like protein 1 [Holothuria leucospilota] diamond 2925 110 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
31168519 31168519 PRJNA781427_P_NODE_27615_length_446_cov_2.340483_g26734_i0 PRJNA781427 27615 446 2.340483 10.43855418 Metazoa 33208 Echinodermata other_Eukaryota 122 5.13e-29   NR XP_071508602.1 105358 g26734 i0 70.4 3.71300448430493 81 24 54.5 0 244 2 2 82 XP_071508602.1 elongation factor-like GTPase 1 [Diadema antillarum] diamond 1656 122 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
31254227 31254227 PRJNA781427_P_NODE_88315_length_245_cov_0.895349_g87431_i0 PRJNA781427 88315 245 0.895349 2.19360505 Asterias rubens 7604 Echinodermata other_Eukaryota 137 7.99e-36   NR XP_033634207.1 7604 g87431 i0 74.1 5.90204081632653 81 21 99.2 0 1 243 347 427 XP_033634207.1 alpha-aminoadipic semialdehyde dehydrogenase-like [Asterias rubens] diamond 1446 137 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
31295186 31295186 PRJNA781427_P_NODE_3395_length_1533_cov_2.920548_g3066_i0 PRJNA781427 3395 1533 2.920548 44.77200084 Echinodermata 7586 Echinodermata other_Eukaryota 80.9 9.18e-12   NR XP_071476292.1 105358 g3066 i0 29.5 1.13111545988258 176 114 34.2 2 319 843 216 382 XP_071476292.1 uncharacterized protein [Diadema antillarum] diamond 1734 80.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
31602317 31602317 PRJNA781427_P_NODE_14576_length_665_cov_2.140203_g13750_i0 PRJNA781427 14576 665 2.140203 14.23234995 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 80.1 2.91e-13   NR KAJ8038071.1 206669 g13750 i0 41.3 0.415037593984962 92 51 40.2 2 296 562 2233 2324 KAJ8038071.1 Neurogenic locus notch-like protein 1 [Holothuria leucospilota] diamond 276 80.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
32013422 32013422 PRJNA781427_P_NODE_58638_length_290_cov_2.935484_g57754_i0 PRJNA781427 58638 290 2.935484 8.5129036 Acanthaster planci 133434 Echinodermata other_Eukaryota 47 0.00215   NR XP_022080046.1 133434 g57754 i0 65.6 0.331034482758621 32 10 32.1 1 242 150 181 212 XP_022080046.1 cadherin EGF LAG seven-pass G-type receptor 1-like [Acanthaster planci] diamond 96 47 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;